Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
ATN1P54259 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.62□□□□□ -1.19
ATN1P54259 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.62□□□□□ -1.19
ATN1P54259 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.62□□□□□ -1.19
ATN1P54259 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
ATN1P54259 Y_RNA.480-201ENST00000384364 102 ntBASIC7.62□□□□□ -1.19
ATN1P54259 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 FTH1P10-202ENST00000430907 550 ntBASIC7.62□□□□□ -1.19
ATN1P54259 RPS29P14-201ENST00000431518 171 ntBASIC7.62□□□□□ -1.19
ATN1P54259 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC7.62□□□□□ -1.19
ATN1P54259 COL11A2P1-205ENST00000441798 676 ntBASIC7.62□□□□□ -1.19
ATN1P54259 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC7.62□□□□□ -1.19
ATN1P54259 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.62□□□□□ -1.19
ATN1P54259 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.62□□□□□ -1.19
ATN1P54259 AC113155.1-201ENST00000511141 769 ntBASIC7.62□□□□□ -1.19
ATN1P54259 RNU6-638P-201ENST00000516582 104 ntBASIC7.62□□□□□ -1.19
ATN1P54259 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC7.62□□□□□ -1.19
ATN1P54259 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
ATN1P54259 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.62□□□□□ -1.19
ATN1P54259 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.62□□□□□ -1.19
ATN1P54259 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.62□□□□□ -1.19
ATN1P54259 SNX18P10-201ENST00000625014 519 ntBASIC7.62□□□□□ -1.19
ATN1P54259 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.62□□□□□ -1.19
ATN1P54259 NAMPTP1-201ENST00000440465 2514 ntBASIC7.62□□□□□ -1.19
ATN1P54259 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
ATN1P54259 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.62□□□□□ -1.19
ATN1P54259 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 RAD17P1-201ENST00000418130 2042 ntBASIC7.62□□□□□ -1.19
ATN1P54259 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC7.62□□□□□ -1.19
ATN1P54259 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
ATN1P54259 AL359396.1-201ENST00000623151 2376 ntBASIC7.62□□□□□ -1.19
ATN1P54259 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
ATN1P54259 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
ATN1P54259 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ATN1P54259 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
ATN1P54259 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.62□□□□□ -1.19
ATN1P54259 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
ATN1P54259 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.61□□□□□ -1.19
ATN1P54259 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ATN1P54259 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ATN1P54259 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.61□□□□□ -1.19
ATN1P54259 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
ATN1P54259 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
ATN1P54259 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
ATN1P54259 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC7.61□□□□□ -1.19
ATN1P54259 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ATN1P54259 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ATN1P54259 RNU6-933P-201ENST00000384424 107 ntBASIC7.61□□□□□ -1.19
ATN1P54259 RNU6-476P-201ENST00000384726 107 ntBASIC7.61□□□□□ -1.19
ATN1P54259 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
ATN1P54259 HSPA8P15-201ENST00000401676 786 ntBASIC7.61□□□□□ -1.19
ATN1P54259 RNA5SP107-201ENST00000411358 122 ntBASIC7.61□□□□□ -1.19
ATN1P54259 RPL30P13-201ENST00000418873 348 ntBASIC7.61□□□□□ -1.19
ATN1P54259 AC006946.1-201ENST00000429106 328 ntBASIC7.61□□□□□ -1.19
ATN1P54259 AC108479.1-201ENST00000431142 427 ntBASIC7.61□□□□□ -1.19
ATN1P54259 SNRPBP1-201ENST00000443634 282 ntBASIC7.61□□□□□ -1.19
ATN1P54259 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.61□□□□□ -1.19
ATN1P54259 RPL23AP28-201ENST00000448062 470 ntBASIC7.61□□□□□ -1.19
ATN1P54259 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC7.61□□□□□ -1.19
ATN1P54259 TRBV26-201ENST00000456572 344 ntBASIC7.61□□□□□ -1.19
ATN1P54259 SNORD2.1-201ENST00000458762 69 ntBASIC7.61□□□□□ -1.19
ATN1P54259 RN7SL214P-201ENST00000487317 265 ntBASIC7.61□□□□□ -1.19
ATN1P54259 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.61□□□□□ -1.19
ATN1P54259 RFPL4AP3-201ENST00000515267 345 ntBASIC7.61□□□□□ -1.19
ATN1P54259 SNRPCP6-201ENST00000528310 210 ntBASIC7.61□□□□□ -1.19
ATN1P54259 AC140063.1-201ENST00000541343 259 ntBASIC7.61□□□□□ -1.19
ATN1P54259 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.61□□□□□ -1.19
ATN1P54259 SMIM12P1-201ENST00000603004 274 ntBASIC7.61□□□□□ -1.19
ATN1P54259 AL138895.2-201ENST00000603019 178 ntBASIC7.61□□□□□ -1.19
ATN1P54259 AL590032.1-201ENST00000604920 252 ntBASIC7.61□□□□□ -1.19
ATN1P54259 AC240442.1-201ENST00000616055 283 ntBASIC7.61□□□□□ -1.19
ATN1P54259 MIR6129-201ENST00000616087 109 ntBASIC7.61□□□□□ -1.19
ATN1P54259 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ATN1P54259 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
ATN1P54259 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
ATN1P54259 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.61□□□□□ -1.19
ATN1P54259 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ATN1P54259 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.61□□□□□ -1.19
ATN1P54259 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.61□□□□□ -1.19
ATN1P54259 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms