Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.81□□□□□ -1.8
ACLYP53396 AP001180.3-201ENST00000582221 145 ntBASIC3.81□□□□□ -1.8
ACLYP53396 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.81□□□□□ -1.8
ACLYP53396 AC006557.5-201ENST00000603126 811 ntBASIC3.81□□□□□ -1.8
ACLYP53396 AC069304.3-201ENST00000603938 1084 ntBASIC3.81□□□□□ -1.8
ACLYP53396 AC010680.4-201ENST00000605334 543 ntBASIC3.81□□□□□ -1.8
ACLYP53396 AC078899.5-201ENST00000612475 178 ntBASIC3.81□□□□□ -1.8
ACLYP53396 AC024023.1-201ENST00000624530 922 ntBASIC3.81□□□□□ -1.8
ACLYP53396 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
ACLYP53396 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ACLYP53396 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.81□□□□□ -1.8
ACLYP53396 ZNF807-201ENST00000328088 1707 ntBASIC3.81□□□□□ -1.8
ACLYP53396 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ACLYP53396 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ACLYP53396 NMD3P1-201ENST00000439704 1488 ntBASIC3.8□□□□□ -1.8
ACLYP53396 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ACLYP53396 DDX6P1-205ENST00000441966 1436 ntBASIC3.8□□□□□ -1.8
ACLYP53396 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ACLYP53396 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.8□□□□□ -1.8
ACLYP53396 AC083799.1-201ENST00000366451 910 ntBASIC3.8□□□□□ -1.8
ACLYP53396 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.8□□□□□ -1.8
ACLYP53396 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ACLYP53396 GSTA8P-201ENST00000404253 637 ntBASIC3.8□□□□□ -1.8
ACLYP53396 HMGN1P24-201ENST00000412282 298 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AMD1P2-201ENST00000412936 992 ntBASIC3.8□□□□□ -1.8
ACLYP53396 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.8□□□□□ -1.8
ACLYP53396 COTL1P1-201ENST00000422309 375 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.8□□□□□ -1.8
ACLYP53396 AF228730.2-201ENST00000438784 848 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AC097262.1-201ENST00000452559 548 ntBASIC3.8□□□□□ -1.8
ACLYP53396 ANP32BP2-201ENST00000454525 545 ntBASIC3.8□□□□□ -1.8
ACLYP53396 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.8□□□□□ -1.8
ACLYP53396 RPS3AP43-201ENST00000479743 781 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.8□□□□□ -1.8
ACLYP53396 AC104687.1-201ENST00000485829 412 ntBASIC3.8□□□□□ -1.8
ACLYP53396 HMGB1P21-201ENST00000502313 581 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AC111193.1-201ENST00000504097 155 ntBASIC3.8□□□□□ -1.8
ACLYP53396 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.8□□□□□ -1.8
ACLYP53396 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.8□□□□□ -1.8
ACLYP53396 RN7SKP82-201ENST00000516786 223 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.8□□□□□ -1.8
ACLYP53396 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ACLYP53396 NOP56P3-201ENST00000549457 385 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AC067805.1-201ENST00000559344 470 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.8□□□□□ -1.8
ACLYP53396 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.8□□□□□ -1.8
ACLYP53396 AC026422.1-201ENST00000623961 452 ntBASIC3.8□□□□□ -1.8
ACLYP53396 AC127502.3-201ENST00000636170 1206 ntBASIC3.8□□□□□ -1.8
ACLYP53396 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ACLYP53396 AC134882.1-201ENST00000603738 1676 ntBASIC3.8□□□□□ -1.8
ACLYP53396 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.8□□□□□ -1.8
ACLYP53396 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.8□□□□□ -1.8
ACLYP53396 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ACLYP53396 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
ACLYP53396 AC138393.1-206ENST00000540997 1886 ntBASIC3.79□□□□□ -1.8
ACLYP53396 AL133412.1-201ENST00000380194 2992 ntBASIC3.79□□□□□ -1.8
ACLYP53396 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
ACLYP53396 U3.15-201ENST00000365398 212 ntBASIC3.79□□□□□ -1.8
ACLYP53396 RNU6-40P-201ENST00000384254 107 ntBASIC3.79□□□□□ -1.8
ACLYP53396 RNU4-47P-201ENST00000410876 114 ntBASIC3.79□□□□□ -1.8
ACLYP53396 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.79□□□□□ -1.8
ACLYP53396 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.79□□□□□ -1.8
ACLYP53396 RPS6P12-201ENST00000432491 726 ntBASIC3.79□□□□□ -1.8
ACLYP53396 AC092809.1-201ENST00000441469 474 ntBASIC3.79□□□□□ -1.8
ACLYP53396 TPTE2P6-202ENST00000445572 1007 ntBASIC3.79□□□□□ -1.8
ACLYP53396 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.79□□□□□ -1.8
ACLYP53396 RSL24D1P3-201ENST00000449255 495 ntBASIC3.79□□□□□ -1.8
ACLYP53396 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.79□□□□□ -1.8
ACLYP53396 AC004069.2-201ENST00000505438 1114 ntBASIC3.79□□□□□ -1.8
ACLYP53396 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.79□□□□□ -1.8
ACLYP53396 OR4R3P-201ENST00000525084 838 ntBASIC3.79□□□□□ -1.8
ACLYP53396 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.79□□□□□ -1.8
ACLYP53396 AC015911.5-201ENST00000587076 451 ntBASIC3.79□□□□□ -1.8
ACLYP53396 SUMO2P14-201ENST00000604488 293 ntBASIC3.79□□□□□ -1.8
ACLYP53396 AC124312.4-201ENST00000605533 310 ntBASIC3.79□□□□□ -1.8
ACLYP53396 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ACLYP53396 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ACLYP53396 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
ACLYP53396 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ACLYP53396 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ACLYP53396 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ACLYP53396 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.78□□□□□ -1.8
ACLYP53396 DCAF13P3-201ENST00000561147 1334 ntBASIC3.78□□□□□ -1.8
ACLYP53396 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.78□□□□□ -1.8
ACLYP53396 RN7SKP44-201ENST00000363602 316 ntBASIC3.78□□□□□ -1.8
ACLYP53396 RSL24D1P1-201ENST00000404972 493 ntBASIC3.78□□□□□ -1.8
ACLYP53396 MTND4P22-201ENST00000413116 1169 ntBASIC3.78□□□□□ -1.8
ACLYP53396 AC234782.4-201ENST00000417646 1048 ntBASIC3.78□□□□□ -1.8
ACLYP53396 AL353678.1-201ENST00000422735 741 ntBASIC3.78□□□□□ -1.8
ACLYP53396 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.78□□□□□ -1.8
ACLYP53396 MRPS18BP2-201ENST00000434310 759 ntBASIC3.78□□□□□ -1.8
ACLYP53396 AL356535.1-201ENST00000440335 398 ntBASIC3.78□□□□□ -1.8
ACLYP53396 RPS29P31-201ENST00000446147 164 ntBASIC3.78□□□□□ -1.8
ACLYP53396 DNAJC19P1-201ENST00000455312 319 ntBASIC3.78□□□□□ -1.8
ACLYP53396 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
ACLYP53396 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.78□□□□□ -1.8
ACLYP53396 HIGD1AP3-201ENST00000515857 278 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms