Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL513175.1-201ENST00000431492 780 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.78□□□□□ -1.96
FREM3P0C091 HMGB3P6-201ENST00000444896 598 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 RPL7P48-201ENST00000461513 746 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 RPS29P26-201ENST00000477483 171 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.78□□□□□ -1.96
FREM3P0C091 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.78□□□□□ -1.96
FREM3P0C091 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
FREM3P0C091 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.78□□□□□ -1.96
FREM3P0C091 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.78□□□□□ -1.96
FREM3P0C091 AC093732.2-201ENST00000607950 274 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 MIR622-201ENST00000638396 96 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
FREM3P0C091 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
FREM3P0C091 AL592437.2-201ENST00000421655 2434 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 Z73965.1-201ENST00000623412 2297 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
FREM3P0C091 RIOK3P1-201ENST00000418778 1528 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
FREM3P0C091 AL353692.2-201ENST00000407054 335 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 RNU4-47P-201ENST00000410876 114 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
FREM3P0C091 RWDD4P2-201ENST00000426392 563 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.78□□□□□ -1.96
FREM3P0C091 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.78□□□□□ -1.96
FREM3P0C091 RWDD4P1-201ENST00000488019 565 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 RN7SKP60-201ENST00000516985 239 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AC009812.2-201ENST00000517657 457 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AC090819.1-201ENST00000523800 1111 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AC007424.1-203ENST00000554613 687 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.78□□□□□ -1.96
FREM3P0C091 AL139286.1-201ENST00000604465 483 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 IGHV3-29-201ENST00000604817 344 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AL513477.2-201ENST00000607858 568 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AC004241.3-201ENST00000611728 517 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 SCARNA15.3-201ENST00000626315 122 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 SCARNA4.1-201ENST00000628597 123 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 OR11H5P-202ENST00000641612 1325 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
FREM3P0C091 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
FREM3P0C091 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
FREM3P0C091 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.77□□□□□ -1.97
FREM3P0C091 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 Y_RNA.111-201ENST00000363248 100 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.77□□□□□ -1.97
FREM3P0C091 SNORA54-201ENST00000384281 123 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 SNORA81-201ENST00000408493 178 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.77□□□□□ -1.97
FREM3P0C091 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
FREM3P0C091 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
FREM3P0C091 AC018797.3-201ENST00000513388 1241 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.77□□□□□ -1.97
FREM3P0C091 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.77□□□□□ -1.97
FREM3P0C091 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.77□□□□□ -1.97
FREM3P0C091 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.77□□□□□ -1.97
FREM3P0C091 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.77□□□□□ -1.97
FREM3P0C091 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
FREM3P0C091 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
FREM3P0C091 SNORD15B-201ENST00000384714 146 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 SNORA46-201ENST00000384762 135 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 HMGB3P23-201ENST00000414981 585 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 IPMKP1-201ENST00000425988 855 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.77□□□□□ -1.97
FREM3P0C091 B3GNT2P1-201ENST00000434960 952 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 CASP3P1-201ENST00000446037 609 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 AL162389.1-201ENST00000449233 177 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 AC080014.1-201ENST00000496877 1201 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
FREM3P0C091 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.77□□□□□ -1.97
FREM3P0C091 AC022146.1-201ENST00000595307 847 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.77□□□□□ -1.97
FREM3P0C091 AC139713.2-210ENST00000641741 992 ntBASIC2.77□□□□□ -1.97
FREM3P0C091 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.77□□□□□ -1.97
FREM3P0C091 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
FREM3P0C091 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
FREM3P0C091 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
FREM3P0C091 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
FREM3P0C091 U3.26-201ENST00000391236 204 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.76□□□□□ -1.97
FREM3P0C091 AC009302.1-201ENST00000417147 390 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 DUTP6-201ENST00000425573 462 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 AC006028.1-201ENST00000438379 402 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.76□□□□□ -1.97
FREM3P0C091 AC011825.1-201ENST00000484967 388 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 HMGB1P3-201ENST00000502802 616 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 PRELID3BP7-201ENST00000503606 469 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
FREM3P0C091 RN7SKP43-201ENST00000516173 320 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 RNA5SP380-201ENST00000517190 98 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.76□□□□□ -1.97
FREM3P0C091 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.76□□□□□ -1.97
FREM3P0C091 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
FREM3P0C091 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.76□□□□□ -1.97
FREM3P0C091 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
FREM3P0C091 MIMT1-201ENST00000597105 1050 ntBASIC2.76□□□□□ -1.97
FREM3P0C091 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms