Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HMGN2P5-201ENST00000436882 273 ntBASIC1.35□□□□□ -2.19
USH2AO75445 RPS24P13-201ENST00000442520 397 ntBASIC1.35□□□□□ -2.19
USH2AO75445 UQCRHP3-201ENST00000451503 251 ntBASIC1.35□□□□□ -2.19
USH2AO75445 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC1.35□□□□□ -2.19
USH2AO75445 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.35□□□□□ -2.19
USH2AO75445 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.35□□□□□ -2.19
USH2AO75445 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC1.35□□□□□ -2.19
USH2AO75445 NF1P10-201ENST00000613227 742 ntBASIC1.35□□□□□ -2.19
USH2AO75445 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 AL445528.1-201ENST00000426330 420 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC1.35□□□□□ -2.19
USH2AO75445 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC1.35□□□□□ -2.19
USH2AO75445 AC068781.1-201ENST00000488231 618 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 AP000867.2-201ENST00000532468 320 ntBASIC1.35□□□□□ -2.19
USH2AO75445 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC1.35□□□□□ -2.19
USH2AO75445 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC1.35□□□□□ -2.19
USH2AO75445 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.35□□□□□ -2.19
USH2AO75445 AP000255.1-201ENST00000610276 676 ntBASIC1.35□□□□□ -2.19
USH2AO75445 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 RPL36AP10-201ENST00000421785 322 ntBASIC1.34□□□□□ -2.19
USH2AO75445 DYNLL1P7-201ENST00000429273 258 ntBASIC1.34□□□□□ -2.19
USH2AO75445 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 ISCA1P2-201ENST00000438679 421 ntBASIC1.34□□□□□ -2.19
USH2AO75445 CEACAMP4-201ENST00000457676 421 ntBASIC1.34□□□□□ -2.19
USH2AO75445 AC084357.1-201ENST00000473404 255 ntBASIC1.34□□□□□ -2.19
USH2AO75445 AC005798.1-201ENST00000513715 387 ntBASIC1.34□□□□□ -2.19
USH2AO75445 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 AC015813.6-201ENST00000624409 5808 ntBASIC1.34□□□□□ -2.19
USH2AO75445 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 RPL7P26-201ENST00000333817 754 ntBASIC1.34□□□□□ -2.19
USH2AO75445 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 HMGB1P48-201ENST00000446155 598 ntBASIC1.34□□□□□ -2.19
USH2AO75445 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC1.34□□□□□ -2.19
USH2AO75445 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.34□□□□□ -2.19
USH2AO75445 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.34□□□□□ -2.19
USH2AO75445 RNA5SP148-201ENST00000516527 94 ntBASIC1.34□□□□□ -2.19
USH2AO75445 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.34□□□□□ -2.19
USH2AO75445 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC1.34□□□□□ -2.19
USH2AO75445 AC090286.3-201ENST00000573133 187 ntBASIC1.34□□□□□ -2.19
USH2AO75445 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.34□□□□□ -2.19
USH2AO75445 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 BX005019.1-201ENST00000561881 1810 ntBASIC1.34□□□□□ -2.19
USH2AO75445 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.34□□□□□ -2.19
USH2AO75445 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
USH2AO75445 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
USH2AO75445 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 AL161431.1-201ENST00000618966 4205 ntBASIC1.34□□□□□ -2.19
USH2AO75445 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 SNORA70E-201ENST00000384492 135 ntBASIC1.34□□□□□ -2.19
USH2AO75445 SEPT7P8-201ENST00000413308 775 ntBASIC1.34□□□□□ -2.19
USH2AO75445 MTCO1P51-201ENST00000427672 1060 ntBASIC1.34□□□□□ -2.19
USH2AO75445 YWHAQP9-201ENST00000445891 512 ntBASIC1.34□□□□□ -2.19
USH2AO75445 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 AC011753.1-201ENST00000451001 220 ntBASIC1.34□□□□□ -2.19
USH2AO75445 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC1.34□□□□□ -2.19
USH2AO75445 TRBV1-201ENST00000476502 284 ntBASIC1.34□□□□□ -2.19
USH2AO75445 CREM-238ENST00000488741 651 ntTSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
USH2AO75445 UBTFL9-201ENST00000534504 1148 ntBASIC1.34□□□□□ -2.19
USH2AO75445 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC1.34□□□□□ -2.19
USH2AO75445 AL359821.1-201ENST00000605519 182 ntBASIC1.34□□□□□ -2.19
USH2AO75445 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.34□□□□□ -2.19
USH2AO75445 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC1.34□□□□□ -2.19
USH2AO75445 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC1.34□□□□□ -2.19
USH2AO75445 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
USH2AO75445 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
USH2AO75445 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
USH2AO75445 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
USH2AO75445 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.34□□□□□ -2.2
USH2AO75445 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC1.34□□□□□ -2.2
USH2AO75445 AC112492.1-201ENST00000449607 712 ntBASIC1.34□□□□□ -2.2
USH2AO75445 AC012123.2-201ENST00000485809 248 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms