Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 MTCO3P46-201ENST00000425787 232 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 PRUNEP1-201ENST00000425846 705 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AL606489.2-201ENST00000433886 234 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 RPL7AP61-201ENST00000443410 636 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 EEF1B2P6-201ENST00000445713 673 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 RBMY2TP-201ENST00000451162 947 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC022133.1-201ENST00000490961 571 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC022616.6-201ENST00000520479 119 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AP005597.4-201ENST00000526762 229 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 OR5M2P-201ENST00000529003 936 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AL352979.3-201ENST00000553515 247 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AL389895.1-201ENST00000554127 252 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC099489.2-201ENST00000574976 260 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AL162431.4-201ENST00000604674 411 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC079684.1-201ENST00000621405 437 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC073592.6-201ENST00000624271 415 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC010149.2-201ENST00000637608 315 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 Y_RNA.46-201ENST00000362695 102 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 RNU6-738P-201ENST00000384531 106 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 MIR606-201ENST00000384851 96 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AL162578.1-201ENST00000406202 378 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 RN7SKP140-201ENST00000411196 284 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 NCOR1P3-201ENST00000420479 303 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC093155.2-201ENST00000420734 937 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC104837.2-201ENST00000427236 424 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 OR2B7P-201ENST00000429302 934 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 RPS15AP1-201ENST00000457423 391 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 RPS15AP17-201ENST00000470598 390 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 SCARNA16.4-201ENST00000516956 187 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC068993.1-201ENST00000546724 589 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 RN7SL708P-201ENST00000580952 299 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC008814.1-201ENST00000603797 406 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC116312.1-201ENST00000606841 314 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC009237.17-201ENST00000618111 748 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AC008121.3-201ENST00000618726 433 ntBASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CAPN6Q9Y6Q1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CAPN6Q9Y6Q1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CAPN6Q9Y6Q1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CAPN6Q9Y6Q1 AL672167.1-204ENST00000641875 3017 ntBASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 AC005294.1-201ENST00000355509 281 ntBASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.58□□□□□ -1.52
CAPN6Q9Y6Q1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms