Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 AC072026.1-201ENST00000605023 201 ntBASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 CAP1P2-201ENST00000417455 1409 ntBASIC8.2□□□□□ -1.1
TRIM35Q9UPQ4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-1298P-201ENST00000362456 101 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-1287P-201ENST00000362914 107 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNA5-8SP7-201ENST00000363443 155 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNY3P11-201ENST00000364153 102 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 SNORD115-7-201ENST00000365306 82 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-1060P-201ENST00000384664 107 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 GCNT1P4-201ENST00000404096 329 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNU4-78P-201ENST00000410940 126 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNA5SP115-201ENST00000411160 107 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-293P-201ENST00000411259 106 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 BMS1P22-201ENST00000414726 313 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 BX682237.1-201ENST00000415016 335 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AC140479.3-201ENST00000418944 1126 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AL354707.3-201ENST00000427308 331 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AC087650.1-201ENST00000431445 468 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 SCARNA18-201ENST00000459004 134 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 MTND6P8-201ENST00000503471 522 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AC010343.2-201ENST00000510162 224 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-1069P-201ENST00000516612 133 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNA5SP434-201ENST00000516647 121 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-919P-201ENST00000516731 104 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 IGKV2-23-201ENST00000518729 323 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RPS29P30-201ENST00000600975 111 ntBASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM35Q9UPQ4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 CDY11P-201ENST00000447168 1651 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 RN7SKP235-201ENST00000410662 305 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 RPL7P46-201ENST00000425129 740 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AC097713.2-201ENST00000430199 356 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 BTF3P6-201ENST00000448054 499 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 VPS25P1-201ENST00000455691 508 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 SNX18P24-201ENST00000505249 671 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 RNU7-4P-201ENST00000516961 62 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AF186190.1-201ENST00000517470 480 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AF279873.1-201ENST00000523393 313 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 DYNLL1P4-201ENST00000549314 266 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 MIR3154-201ENST00000577829 84 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AL450226.2-201ENST00000622913 439 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 NBPF8-201ENST00000583271 5330 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms