Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC003001.2-201ENST00000616294 831 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AL356321.1-201ENST00000621360 228 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 Z83843.1-201ENST00000604070 3685 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 RAD1P1-201ENST00000231383 813 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 MIR30E-201ENST00000362104 92 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC126124.2-201ENST00000413542 321 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC048351.1-201ENST00000420064 602 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 ZNF965P-201ENST00000432501 817 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC017015.1-201ENST00000477387 286 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 RFPL1S-203ENST00000539579 330 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC068446.3-201ENST00000555285 382 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 HMGB3P26-201ENST00000560051 582 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC023158.1-201ENST00000561632 1025 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 CKS1BP3-201ENST00000600888 237 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 uc_338.32-201ENST00000615087 172 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC009464.1-201ENST00000615731 469 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC091948.2-201ENST00000636510 279 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 AC009501.3-201ENST00000605001 1352 ntBASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NPC1L1Q9UHC9 SNORD51.1-201ENST00000365405 77 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 RNU6-40P-201ENST00000384254 107 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 MIR128-1-201ENST00000384921 82 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 RNA5SP120-201ENST00000410900 112 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AL513174.1-201ENST00000423182 629 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 MTCO3P21-201ENST00000430791 643 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AL353705.1-201ENST00000433468 480 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 RNU6-1218P-201ENST00000458990 108 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 RNU7-27P-201ENST00000459281 62 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AC073522.1-201ENST00000483312 377 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AC093663.2-201ENST00000484625 313 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 RNU6-1308P-201ENST00000516817 103 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 RN7SKP60-201ENST00000516985 239 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AC005242.1-201ENST00000585658 438 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 AC011472.4-201ENST00000615848 491 ntBASIC4.53□□□□□ -1.69
NPC1L1Q9UHC9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 HSPA8P19-201ENST00000505359 1517 ntBASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 PHKBP1-201ENST00000450951 1951 ntBASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AC073464.3-201ENST00000422564 712 ntBASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AC017083.1-201ENST00000428093 483 ntBASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 Z75741.1-201ENST00000446793 314 ntBASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.52□□□□□ -1.69
NPC1L1Q9UHC9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms