Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL355802.3-201ENST00000607571 545 ntBASIC6.1□□□□□ -1.43
CNTN3Q9P232 AC090971.5-201ENST00000621102 293 ntBASIC6.1□□□□□ -1.43
CNTN3Q9P232 AC090617.10-201ENST00000624308 134 ntBASIC6.1□□□□□ -1.43
CNTN3Q9P232 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.1□□□□□ -1.43
CNTN3Q9P232 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.1□□□□□ -1.43
CNTN3Q9P232 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNTN3Q9P232 AC006020.1-201ENST00000420179 1854 ntBASIC6.1□□□□□ -1.43
CNTN3Q9P232 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CNTN3Q9P232 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.1□□□□□ -1.43
CNTN3Q9P232 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CNTN3Q9P232 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CNTN3Q9P232 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNTN3Q9P232 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNTN3Q9P232 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 RN7SKP160-201ENST00000363804 340 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 RNU1-146P-201ENST00000364015 165 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 U3.10-201ENST00000364459 214 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 RPL11P3-201ENST00000395256 523 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC004987.3-201ENST00000413879 771 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC127526.1-201ENST00000417526 366 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 HMGB1P18-201ENST00000438801 619 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AL049734.2-201ENST00000441066 616 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 RPL12P39-201ENST00000455456 496 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC130509.1-201ENST00000464158 433 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 RPS4XP14-201ENST00000493072 781 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 RN7SL284P-201ENST00000498823 275 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 RN7SKP13-201ENST00000515933 244 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 RNU6-1170P-201ENST00000515974 106 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 RNU6-410P-201ENST00000517006 107 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC107934.1-201ENST00000522215 217 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC007225.2-201ENST00000562529 256 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC093249.1-201ENST00000567049 203 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC015720.2-201ENST00000567709 334 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC098848.2-201ENST00000588023 330 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC130324.3-201ENST00000614165 542 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AL031658.2-201ENST00000616850 651 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC079684.1-201ENST00000621405 437 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AC125336.1-201ENST00000508893 2827 ntBASIC6.09□□□□□ -1.43
CNTN3Q9P232 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNTN3Q9P232 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CNTN3Q9P232 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.09□□□□□ -1.44
CNTN3Q9P232 AC138907.8-201ENST00000623981 2256 ntBASIC6.09□□□□□ -1.44
CNTN3Q9P232 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.09□□□□□ -1.44
CNTN3Q9P232 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CNTN3Q9P232 MTND5P3-201ENST00000438536 1800 ntBASIC6.09□□□□□ -1.44
CNTN3Q9P232 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC140134.1-201ENST00000511830 3544 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 RNU6-606P-201ENST00000384721 111 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AL391361.1-201ENST00000405580 489 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 RN7SKP17-201ENST00000411242 351 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC006548.1-201ENST00000427470 102 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 RPS15AP9-201ENST00000439856 381 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC019185.1-201ENST00000442718 389 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms