Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 SNORA9.2-201ENST00000365361 133 ntBASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 RPL21P112-201ENST00000434403 463 ntBASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 AC015911.5-201ENST00000587076 451 ntBASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 uc_338.1-201ENST00000612113 180 ntBASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PHRF1Q9P1Y6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AL445529.1-201ENST00000398713 389 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 RPS12P5-201ENST00000423449 371 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AC022018.1-201ENST00000430685 241 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AC021146.1-201ENST00000511202 716 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 CYCSP39-201ENST00000565821 309 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AL365400.2-201ENST00000605604 902 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 IGHVIII-44-202ENST00000636235 289 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 RNU6-859P-201ENST00000362728 107 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 SNORD15B-201ENST00000384714 146 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AL353692.2-201ENST00000407054 335 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 BX679664.1-201ENST00000434429 253 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AL591623.2-201ENST00000449978 222 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AC079600.2-201ENST00000550076 130 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 RPL23AP92-201ENST00000603609 255 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 LINC00901.1-201ENST00000617252 152 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 MAPK10-373ENST00000641983 6772 ntBASIC4.06□□□□□ -1.76
PHRF1Q9P1Y6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 AC128713.1-201ENST00000471495 306 ntBASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 TGIF1P1-201ENST00000558095 802 ntBASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHRF1Q9P1Y6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 AC012020.1-201ENST00000624541 1728 ntBASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 MTCO1P7-201ENST00000419523 1542 ntBASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 AL138878.1-201ENST00000405131 347 ntBASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 BMS1P22-201ENST00000414726 313 ntBASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 BTF3P9-201ENST00000418784 283 ntBASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 FTH1P1-201ENST00000437933 532 ntBASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 AC112184.1-201ENST00000505179 312 ntBASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 YWHAEP4-201ENST00000505390 198 ntBASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PHRF1Q9P1Y6 MIR34A-201ENST00000385130 110 ntBASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 AL365396.1-201ENST00000430854 671 ntBASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 HMGB3P11-201ENST00000440127 604 ntBASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 AC010401.1-201ENST00000463867 348 ntBASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 MIR4425-201ENST00000580572 84 ntBASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 RMST_8.1-201ENST00000610287 165 ntBASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 AC087241.4-201ENST00000612441 480 ntBASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PHRF1Q9P1Y6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
PHRF1Q9P1Y6 DUTP6-201ENST00000425573 462 ntBASIC4.03□□□□□ -1.77
PHRF1Q9P1Y6 RPS26P40-201ENST00000435209 294 ntBASIC4.03□□□□□ -1.77
PHRF1Q9P1Y6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.03□□□□□ -1.77
PHRF1Q9P1Y6 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.03□□□□□ -1.77
PHRF1Q9P1Y6 RFPL4AP3-201ENST00000515267 345 ntBASIC4.03□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms