Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC008083.2-201ENST00000546707 476 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 AL442663.2-201ENST00000554385 511 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CD248Q9HCU0 AC005084.1-201ENST00000605160 304 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 uc_338.9-201ENST00000617424 182 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 AL158209.2-201ENST00000619266 216 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 AP000648.2-201ENST00000624182 404 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 AC009951.1-201ENST00000623674 2614 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CD248Q9HCU0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CD248Q9HCU0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CD248Q9HCU0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CD248Q9HCU0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CD248Q9HCU0 AC074029.4-201ENST00000624796 1859 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 CR383658.2-201ENST00000547576 1525 ntBASIC5.28□□□□□ -1.56
CD248Q9HCU0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.28□□□□□ -1.56
CD248Q9HCU0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CD248Q9HCU0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC006026.1-201ENST00000444025 1803 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 AL592182.3-201ENST00000642132 3304 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 NEAT1-202ENST00000501122 22743 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 RNU6-621P-201ENST00000364752 109 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 Y_RNA.302-201ENST00000364997 102 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 MIR600-201ENST00000385007 98 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 HSPA8P15-201ENST00000401676 786 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 RPS3AP23-201ENST00000401762 784 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 HMGB3P18-201ENST00000406327 590 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC007738.1-201ENST00000413892 348 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC005002.1-201ENST00000447458 540 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 RPS20P24-201ENST00000457473 361 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 RPL23AP12-201ENST00000467573 473 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC022795.1-201ENST00000473808 480 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC083982.1-201ENST00000485679 344 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC007686.1-201ENST00000488511 463 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 OR5AK3P-201ENST00000527486 1297 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 RN7SL52P-201ENST00000584271 284 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 VN1R79P-201ENST00000593540 513 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AL162431.4-201ENST00000604674 411 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC098614.4-201ENST00000607601 462 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AP005137.2-201ENST00000609238 400 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC091905.4-201ENST00000623432 202 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 AC124864.2-201ENST00000624736 186 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 MTCO1P23-201ENST00000415223 1526 ntBASIC5.27□□□□□ -1.57
CD248Q9HCU0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CD248Q9HCU0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD248Q9HCU0 MFSD8-216ENST00000641147 4009 ntBASIC5.26□□□□□ -1.57
CD248Q9HCU0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CD248Q9HCU0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CD248Q9HCU0 DDX18P4-201ENST00000511690 1966 ntBASIC5.26□□□□□ -1.57
CD248Q9HCU0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.26□□□□□ -1.57
CD248Q9HCU0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CD248Q9HCU0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.26□□□□□ -1.57
CD248Q9HCU0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
CD248Q9HCU0 RN7SKP95-201ENST00000362860 303 ntBASIC5.26□□□□□ -1.57
CD248Q9HCU0 SNORA63-201ENST00000363450 132 ntBASIC5.26□□□□□ -1.57
CD248Q9HCU0 RN7SKP103-201ENST00000363848 320 ntBASIC5.26□□□□□ -1.57
CD248Q9HCU0 RNU6-374P-201ENST00000364146 108 ntBASIC5.26□□□□□ -1.57
CD248Q9HCU0 RNA5SP90-201ENST00000364801 99 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms