Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 RAB28P1-201ENST00000411517 641 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 RPL30P2-201ENST00000414021 291 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 FAR1P1-201ENST00000427163 934 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC006989.1-201ENST00000427212 131 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 CYCSP43-201ENST00000438233 310 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AL133162.1-201ENST00000463228 453 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC007537.2-201ENST00000472093 511 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 UBE2CP3-201ENST00000502715 450 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 RNU6-488P-201ENST00000515918 99 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 RNU6-202P-201ENST00000515998 96 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 MTCYBP41-201ENST00000528913 1123 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 IGHV3-29-201ENST00000604817 344 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC012467.1-201ENST00000607740 256 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AL163051.2-201ENST00000618976 735 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 AL732372.2-225ENST00000642124 456 ntBASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 OR4A15-201ENST00000314706 1035 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 RNU6-335P-201ENST00000364563 113 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 RNU6-283P-201ENST00000364788 107 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 RPL32P23-201ENST00000397237 405 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 MTND4P22-201ENST00000413116 1169 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AL139247.1-201ENST00000422768 325 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 HMGB3P5-201ENST00000428894 612 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 RSL24D1P8-201ENST00000434442 492 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 RPS26P56-201ENST00000444468 240 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC010655.1-201ENST00000449336 292 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 HMGB1P38-201ENST00000490557 577 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 RPL23AP55-201ENST00000498163 452 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC021146.1-201ENST00000511202 716 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC093853.1-201ENST00000515689 483 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC026616.1-201ENST00000523157 525 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC022916.3-201ENST00000592961 742 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AL732618.1-201ENST00000623251 301 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
LRRC40Q9H9A6 AC000367.1-201ENST00000452711 1766 ntBASIC3.71□□□□□ -1.81
LRRC40Q9H9A6 SAGE4P-201ENST00000442271 3381 ntBASIC3.71□□□□□ -1.81
LRRC40Q9H9A6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RN7SKP227-201ENST00000364445 330 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AL138880.1-201ENST00000405824 642 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RN7SKP156-201ENST00000410308 342 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RPL31P2-201ENST00000413849 377 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AL513174.1-201ENST00000423182 629 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms