Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC006499.2-201ENST00000513470 337 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 SNORA48.10-201ENST00000516965 160 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 SNORA25.17-201ENST00000517184 124 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC027309.2-201ENST00000520566 192 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 GTF2IP11-201ENST00000526931 420 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AL163153.1-201ENST00000554223 283 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AL513327.3-201ENST00000602618 469 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AP001330.4-201ENST00000604350 154 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC009161.2-201ENST00000624626 138 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AP005435.3-201ENST00000531260 3198 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC092447.10-201ENST00000620607 1652 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC016745.2-201ENST00000608834 3443 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 Y_RNA.28-201ENST00000362554 111 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 U3.2-201ENST00000362981 210 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 Y_RNA.197-201ENST00000364004 102 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 Y_RNA.476-201ENST00000384347 108 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-1222P-201ENST00000384615 107 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RNY4P36-201ENST00000391116 96 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RPS20P2-201ENST00000402520 389 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RNU2-8P-201ENST00000410727 190 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RPL23AP27-201ENST00000415161 451 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 METTL15P3-201ENST00000415522 1221 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AL354766.1-201ENST00000423396 542 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 DPY19L1P2-201ENST00000426647 915 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 MED28P3-201ENST00000444288 531 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC091685.2-201ENST00000454924 864 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 CEACAMP4-201ENST00000457676 421 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 NF1P3-201ENST00000457709 450 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC010655.3-201ENST00000478818 450 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RN7SL808P-201ENST00000496066 299 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-1271P-201ENST00000517049 105 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AP006245.2-201ENST00000522004 300 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 COPS8P3-201ENST00000526024 482 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 SNRPGP18-201ENST00000553000 214 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RPSAP73-201ENST00000614820 330 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 uc_338.22-201ENST00000622722 187 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AL133216.2-202ENST00000634512 349 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 ELL2P4-201ENST00000446870 1376 ntBASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
SHKBP1Q8TBC3 AC004158.1-201ENST00000564508 4319 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC073343.1-201ENST00000328239 651 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms