Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
SRP9P49458 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3□□□□□ -1.93
SRP9P49458 RPL23AP69-201ENST00000431134 458 ntBASIC3□□□□□ -1.93
SRP9P49458 AC073063.1-201ENST00000434352 607 ntBASIC3□□□□□ -1.93
SRP9P49458 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3□□□□□ -1.93
SRP9P49458 HMGB1P12-201ENST00000438594 598 ntBASIC3□□□□□ -1.93
SRP9P49458 ISCA1P2-201ENST00000438679 421 ntBASIC3□□□□□ -1.93
SRP9P49458 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3□□□□□ -1.93
SRP9P49458 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
SRP9P49458 RPL21P8-201ENST00000465083 535 ntBASIC3□□□□□ -1.93
SRP9P49458 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3□□□□□ -1.93
SRP9P49458 SETP14-201ENST00000497538 873 ntBASIC3□□□□□ -1.93
SRP9P49458 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3□□□□□ -1.93
SRP9P49458 PTGES3P3-201ENST00000511479 482 ntBASIC3□□□□□ -1.93
SRP9P49458 RN7SKP282-201ENST00000516824 299 ntBASIC3□□□□□ -1.93
SRP9P49458 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3□□□□□ -1.93
SRP9P49458 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3□□□□□ -1.93
SRP9P49458 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3□□□□□ -1.93
SRP9P49458 AC006557.5-201ENST00000603126 811 ntBASIC3□□□□□ -1.93
SRP9P49458 U3.45-201ENST00000607547 219 ntBASIC3□□□□□ -1.93
SRP9P49458 uc_338.9-201ENST00000617424 182 ntBASIC3□□□□□ -1.93
SRP9P49458 AC243312.2-201ENST00000623340 601 ntBASIC3□□□□□ -1.93
SRP9P49458 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3□□□□□ -1.93
SRP9P49458 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SRP9P49458 AC110774.1-201ENST00000623567 2018 ntBASIC3□□□□□ -1.93
SRP9P49458 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
SRP9P49458 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 FAM35CP-201ENST00000554755 2470 ntBASIC2.99□□□□□ -1.93
SRP9P49458 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SRP9P49458 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.99□□□□□ -1.93
SRP9P49458 API5P2-201ENST00000397055 1498 ntBASIC2.99□□□□□ -1.93
SRP9P49458 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 AL354719.1-201ENST00000406535 843 ntBASIC2.99□□□□□ -1.93
SRP9P49458 RN7SKP27-201ENST00000410684 333 ntBASIC2.99□□□□□ -1.93
SRP9P49458 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.99□□□□□ -1.93
SRP9P49458 HMGB3P23-201ENST00000414981 585 ntBASIC2.99□□□□□ -1.93
SRP9P49458 NDUFB4P5-201ENST00000415445 361 ntBASIC2.99□□□□□ -1.93
SRP9P49458 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 AL356968.1-201ENST00000416622 474 ntBASIC2.99□□□□□ -1.93
SRP9P49458 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.99□□□□□ -1.93
SRP9P49458 AL035458.1-201ENST00000433096 585 ntBASIC2.99□□□□□ -1.93
SRP9P49458 ARL4AP4-201ENST00000434170 518 ntBASIC2.99□□□□□ -1.93
SRP9P49458 AC092641.1-201ENST00000440229 772 ntBASIC2.99□□□□□ -1.93
SRP9P49458 PDSS1P2-201ENST00000449397 678 ntBASIC2.99□□□□□ -1.93
SRP9P49458 CALM1P2-201ENST00000452941 448 ntBASIC2.99□□□□□ -1.93
SRP9P49458 AC007967.1-201ENST00000455422 1159 ntBASIC2.99□□□□□ -1.93
SRP9P49458 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.99□□□□□ -1.93
SRP9P49458 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 RPL31P13-201ENST00000484151 370 ntBASIC2.99□□□□□ -1.93
SRP9P49458 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
SRP9P49458 KCTD9P5-201ENST00000504141 1170 ntBASIC2.99□□□□□ -1.93
SRP9P49458 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.99□□□□□ -1.93
SRP9P49458 RN7SKP157-201ENST00000516174 282 ntBASIC2.99□□□□□ -1.93
SRP9P49458 SNORA67.7-201ENST00000516664 135 ntBASIC2.99□□□□□ -1.93
SRP9P49458 AC107934.2-201ENST00000518653 310 ntBASIC2.99□□□□□ -1.93
SRP9P49458 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.99□□□□□ -1.93
SRP9P49458 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 AC008739.3-201ENST00000603262 127 ntBASIC2.99□□□□□ -1.93
SRP9P49458 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.99□□□□□ -1.93
SRP9P49458 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SRP9P49458 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.99□□□□□ -1.93
SRP9P49458 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SRP9P49458 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.99□□□□□ -1.93
SRP9P49458 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRP9P49458 ELL2P4-201ENST00000446870 1376 ntBASIC2.99□□□□□ -1.93
SRP9P49458 MTND4P34-201ENST00000572715 1371 ntBASIC2.99□□□□□ -1.93
SRP9P49458 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SRP9P49458 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.98□□□□□ -1.93
SRP9P49458 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.98□□□□□ -1.93
SRP9P49458 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SRP9P49458 FRG1CP-201ENST00000358464 769 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AC234772.1-201ENST00000377927 937 ntBASIC2.98□□□□□ -1.93
SRP9P49458 MIR449B-201ENST00000384995 97 ntBASIC2.98□□□□□ -1.93
SRP9P49458 MIR607-201ENST00000385241 96 ntBASIC2.98□□□□□ -1.93
SRP9P49458 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SRP9P49458 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRP9P49458 ATP5F1P3-201ENST00000397213 657 ntBASIC2.98□□□□□ -1.93
SRP9P49458 RN7SKP53-201ENST00000411337 315 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.98□□□□□ -1.93
SRP9P49458 SYF2P2-201ENST00000417620 583 ntBASIC2.98□□□□□ -1.93
SRP9P49458 BX842559.1-201ENST00000419615 532 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.98□□□□□ -1.93
SRP9P49458 B3GNT2P1-201ENST00000434960 952 ntBASIC2.98□□□□□ -1.93
SRP9P49458 SETP8-201ENST00000435341 628 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AC093716.1-201ENST00000435923 377 ntBASIC2.98□□□□□ -1.93
SRP9P49458 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.98□□□□□ -1.93
SRP9P49458 RPS15AP29-201ENST00000445539 400 ntBASIC2.98□□□□□ -1.93
SRP9P49458 RPL21P23-201ENST00000446654 460 ntBASIC2.98□□□□□ -1.93
SRP9P49458 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.98□□□□□ -1.93
SRP9P49458 RPL23AP67-201ENST00000465341 474 ntBASIC2.98□□□□□ -1.93
SRP9P49458 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms