Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC012531.5-201ENST00000611375 151 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AC083809.1-201ENST00000615051 472 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AL391261.4-201ENST00000616012 481 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 RMST_10.1-201ENST00000616309 154 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CR1P49238 ZYXP1-201ENST00000617638 118 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CX3CR1P49238 FP236240.3-201ENST00000623061 327 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 HPVC1-201ENST00000629899 1198 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CX3CR1P49238 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AL163152.1-201ENST00000642001 374 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CR1P49238 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CR1P49238 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 AL592494.2-201ENST00000425455 1548 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 AL353746.1-201ENST00000566293 6881 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CX3CR1P49238 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.25□□□□□ -1.89
CX3CR1P49238 MIR184-201ENST00000384962 84 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 ATP5F1P6-201ENST00000402768 767 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 AL138880.1-201ENST00000405824 642 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 SNORA3.3-201ENST00000408712 125 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.25□□□□□ -1.89
CX3CR1P49238 HMGB3P5-201ENST00000428894 612 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 MOB1AP1-201ENST00000430903 535 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CR1P49238 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.25□□□□□ -1.89
CX3CR1P49238 Z99714.1-201ENST00000450463 807 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 AC099563.1-201ENST00000456086 418 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 RPL23AP14-201ENST00000468281 468 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 RPS27P23-201ENST00000487608 251 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 HMGB1P38-201ENST00000490557 577 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 MTND2P31-201ENST00000512602 616 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 RNU6-488P-201ENST00000515918 99 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 IGKV2D-36-201ENST00000518643 226 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.25□□□□□ -1.89
CX3CR1P49238 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.25□□□□□ -1.89
CX3CR1P49238 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.25□□□□□ -1.89
CX3CR1P49238 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CR1P49238 CYCSP30-201ENST00000546447 172 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 AL121766.1-201ENST00000547436 487 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CR1P49238 KLKP1-201ENST00000595979 403 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.25□□□□□ -1.89
CX3CR1P49238 KATNBL1P5-201ENST00000605015 517 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CR1P49238 AC096586.1-201ENST00000610267 561 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 AC005344.1-201ENST00000613391 459 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 MIR6875-201ENST00000617506 72 ntBASIC3.25□□□□□ -1.89
CX3CR1P49238 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CR1P49238 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.25□□□□□ -1.89
CX3CR1P49238 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CX3CR1P49238 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CR1P49238 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CX3CR1P49238 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CR1P49238 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CX3CR1P49238 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CR1P49238 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CR1P49238 SNORA7.2-201ENST00000364446 145 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 SNORD6-201ENST00000365444 73 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CR1P49238 AC068538.1-201ENST00000376856 336 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.24□□□□□ -1.89
CX3CR1P49238 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 SNORA57.3-201ENST00000411095 141 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 USP9YP19-201ENST00000412165 485 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 TOMM22P1-201ENST00000418578 312 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 PAICSP7-201ENST00000419829 962 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AL159169.1-201ENST00000421119 127 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AL513174.1-201ENST00000423182 629 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.24□□□□□ -1.89
CX3CR1P49238 FAM204CP-201ENST00000424489 642 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 VN1R42P-201ENST00000424651 344 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AC010881.1-201ENST00000433830 235 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.24□□□□□ -1.89
CX3CR1P49238 NDUFB1P1-201ENST00000435191 180 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 CYCSP43-201ENST00000438233 310 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 RPS26P56-201ENST00000444468 240 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CR1P49238 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.24□□□□□ -1.89
CX3CR1P49238 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms