Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.35□□□□□ -1.71
HADHAP40939 RN7SL98P-201ENST00000462271 300 ntBASIC4.35□□□□□ -1.71
HADHAP40939 RPL35AP15-201ENST00000468042 339 ntBASIC4.35□□□□□ -1.71
HADHAP40939 AC013356.1-201ENST00000489027 564 ntBASIC4.35□□□□□ -1.71
HADHAP40939 AC084024.2-201ENST00000503480 791 ntBASIC4.35□□□□□ -1.71
HADHAP40939 AC017037.1-201ENST00000508460 471 ntBASIC4.35□□□□□ -1.71
HADHAP40939 RNU6-1261P-201ENST00000517194 104 ntBASIC4.35□□□□□ -1.71
HADHAP40939 RNU4-60P-201ENST00000517239 135 ntBASIC4.35□□□□□ -1.71
HADHAP40939 IGLVIV-65-201ENST00000517313 360 ntBASIC4.35□□□□□ -1.71
HADHAP40939 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.35□□□□□ -1.71
HADHAP40939 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.35□□□□□ -1.71
HADHAP40939 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.35□□□□□ -1.71
HADHAP40939 AP000619.3-201ENST00000535634 1127 ntBASIC4.35□□□□□ -1.71
HADHAP40939 OR6C73P-201ENST00000546432 358 ntBASIC4.35□□□□□ -1.71
HADHAP40939 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.35□□□□□ -1.71
HADHAP40939 SNORD39.3-201ENST00000584451 71 ntBASIC4.35□□□□□ -1.71
HADHAP40939 BNIP3P26-201ENST00000600827 554 ntBASIC4.35□□□□□ -1.71
HADHAP40939 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.35□□□□□ -1.71
HADHAP40939 AC022509.4-201ENST00000621404 572 ntBASIC4.35□□□□□ -1.71
HADHAP40939 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.35□□□□□ -1.71
HADHAP40939 AC140479.6-201ENST00000633535 357 ntBASIC4.35□□□□□ -1.71
HADHAP40939 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HADHAP40939 MTND4P10-201ENST00000446199 1363 ntBASIC4.35□□□□□ -1.71
HADHAP40939 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HADHAP40939 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HADHAP40939 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.34□□□□□ -1.71
HADHAP40939 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.34□□□□□ -1.71
HADHAP40939 AC106871.1-201ENST00000568324 3102 ntBASIC4.34□□□□□ -1.71
HADHAP40939 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HADHAP40939 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HADHAP40939 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.34□□□□□ -1.71
HADHAP40939 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HADHAP40939 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HADHAP40939 RPL32P3-201ENST00000359025 275 ntBASIC4.34□□□□□ -1.71
HADHAP40939 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HADHAP40939 MIR331-201ENST00000362302 94 ntBASIC4.34□□□□□ -1.71
HADHAP40939 RNU6-560P-201ENST00000364007 108 ntBASIC4.34□□□□□ -1.71
HADHAP40939 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.34□□□□□ -1.71
HADHAP40939 LUZP4P1-201ENST00000415420 344 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AL161631.1-201ENST00000417933 486 ntBASIC4.34□□□□□ -1.71
HADHAP40939 USP12PY-201ENST00000427677 1064 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AL512326.1-201ENST00000443050 721 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.34□□□□□ -1.71
HADHAP40939 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HADHAP40939 SNORD11.1-201ENST00000459482 85 ntBASIC4.34□□□□□ -1.71
HADHAP40939 RN7SL585P-201ENST00000470538 280 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC011979.1-201ENST00000472300 483 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC068587.1-201ENST00000483613 781 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC108729.1-201ENST00000487812 947 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC026979.1-201ENST00000492525 396 ntBASIC4.34□□□□□ -1.71
HADHAP40939 RPL5P23-201ENST00000496040 868 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.34□□□□□ -1.71
HADHAP40939 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.34□□□□□ -1.71
HADHAP40939 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.34□□□□□ -1.71
HADHAP40939 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.34□□□□□ -1.71
HADHAP40939 RNU6-1225P-201ENST00000516336 65 ntBASIC4.34□□□□□ -1.71
HADHAP40939 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.34□□□□□ -1.71
HADHAP40939 TOMM20P2-201ENST00000540082 421 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.34□□□□□ -1.71
HADHAP40939 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.34□□□□□ -1.71
HADHAP40939 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.34□□□□□ -1.71
HADHAP40939 AC090695.1-201ENST00000561269 1222 ntBASIC4.34□□□□□ -1.71
HADHAP40939 YWHAQP7-201ENST00000603536 658 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC091946.2-201ENST00000606105 291 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.34□□□□□ -1.71
HADHAP40939 AL513477.2-201ENST00000607858 568 ntBASIC4.34□□□□□ -1.71
HADHAP40939 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.34□□□□□ -1.71
HADHAP40939 MIR6758-201ENST00000620653 63 ntBASIC4.34□□□□□ -1.71
HADHAP40939 MIR7702-201ENST00000621931 59 ntBASIC4.34□□□□□ -1.71
HADHAP40939 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HADHAP40939 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HADHAP40939 IQCB2P-201ENST00000401788 1633 ntBASIC4.34□□□□□ -1.71
HADHAP40939 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HADHAP40939 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
HADHAP40939 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.34□□□□□ -1.71
HADHAP40939 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HADHAP40939 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HADHAP40939 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.34□□□□□ -1.72
HADHAP40939 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HADHAP40939 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.33□□□□□ -1.72
HADHAP40939 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HADHAP40939 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HADHAP40939 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HADHAP40939 ZNF734P-201ENST00000419494 1534 ntBASIC4.33□□□□□ -1.72
HADHAP40939 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HADHAP40939 RNA5SP388-201ENST00000362584 119 ntBASIC4.33□□□□□ -1.72
HADHAP40939 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HADHAP40939 AC068538.1-201ENST00000376856 336 ntBASIC4.33□□□□□ -1.72
HADHAP40939 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HADHAP40939 U3.22-201ENST00000391120 215 ntBASIC4.33□□□□□ -1.72
HADHAP40939 SNORD66.1-201ENST00000391230 76 ntBASIC4.33□□□□□ -1.72
HADHAP40939 ERHP2-201ENST00000402323 299 ntBASIC4.33□□□□□ -1.72
HADHAP40939 AL139095.3-201ENST00000419672 1203 ntBASIC4.33□□□□□ -1.72
HADHAP40939 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.33□□□□□ -1.72
HADHAP40939 AL592293.2-201ENST00000422292 996 ntBASIC4.33□□□□□ -1.72
HADHAP40939 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.33□□□□□ -1.72
HADHAP40939 RPL7P44-201ENST00000424827 742 ntBASIC4.33□□□□□ -1.72
HADHAP40939 RPS27AP12-201ENST00000429552 465 ntBASIC4.33□□□□□ -1.72
HADHAP40939 VDAC1P6-201ENST00000430062 855 ntBASIC4.33□□□□□ -1.72
HADHAP40939 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms