Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN6P29350 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN6P29350 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN6P29350 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN6P29350 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN6P29350 AC004217.3-201ENST00000551552 878 ntBASIC3.73□□□□□ -1.81
PTPN6P29350 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPN6P29350 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPN6P29350 NIFKP8-201ENST00000560500 874 ntBASIC3.73□□□□□ -1.81
PTPN6P29350 AC090877.1-201ENST00000561418 344 ntBASIC3.73□□□□□ -1.81
PTPN6P29350 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN6P29350 ZNF192P1-203ENST00000565888 810 ntBASIC3.73□□□□□ -1.81
PTPN6P29350 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.73□□□□□ -1.81
PTPN6P29350 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN6P29350 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN6P29350 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN6P29350 AL109618.2-201ENST00000605527 211 ntBASIC3.73□□□□□ -1.81
PTPN6P29350 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN6P29350 RLIMP1-201ENST00000339626 1680 ntBASIC3.73□□□□□ -1.81
PTPN6P29350 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PTPN6P29350 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN6P29350 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN6P29350 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN6P29350 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN6P29350 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN6P29350 NCAPGP1-201ENST00000505112 1814 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN6P29350 USP8P1-201ENST00000494673 3183 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN6P29350 SNORA51.2-201ENST00000364595 132 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PTPN6P29350 RNU6-207P-201ENST00000384137 107 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 ATP5F1P4-201ENST00000397288 746 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN6P29350 PPIAP31-201ENST00000405422 495 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 RPL21P65-201ENST00000406094 466 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AL355615.1-201ENST00000406187 641 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AC244098.2-201ENST00000422068 99 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN6P29350 RPL36P19-201ENST00000430744 301 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN6P29350 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 CYCSP43-201ENST00000438233 310 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN6P29350 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPN6P29350 AC010307.1-201ENST00000467206 836 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 RPL21P18-201ENST00000469899 480 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN6P29350 AC091959.2-201ENST00000477363 321 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN6P29350 NAMPTP2-201ENST00000505629 1115 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPN6P29350 HMGN1P15-201ENST00000513870 295 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 MTCO3P27-201ENST00000514397 196 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AC008802.1-201ENST00000519121 791 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.72□□□□□ -1.81
PTPN6P29350 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN6P29350 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN6P29350 AC074050.1-201ENST00000563247 211 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN6P29350 BPTFP1-201ENST00000579209 492 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 MIR4644-201ENST00000579929 84 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.72□□□□□ -1.81
PTPN6P29350 AC093227.2-201ENST00000589357 285 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.72□□□□□ -1.81
PTPN6P29350 AC133794.1-201ENST00000602731 914 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 IGHV3-29-201ENST00000604817 344 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AC068620.4-201ENST00000636730 1182 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 LINC00561-201ENST00000565815 2738 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 ELL2P4-201ENST00000446870 1376 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN6P29350 AC116096.1-201ENST00000566804 2314 ntBASIC3.72□□□□□ -1.81
PTPN6P29350 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN6P29350 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN6P29350 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.71□□□□□ -1.81
PTPN6P29350 CASC19-261ENST00000641853 1638 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTPN6P29350 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTPN6P29350 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PTPN6P29350 RNU1-64P-201ENST00000365443 163 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTPN6P29350 RN7SKP56-201ENST00000410513 331 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 RPL7AP73-201ENST00000413490 353 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 AC005517.2-201ENST00000424673 553 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 AL117339.2-201ENST00000430475 180 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 AC010881.1-201ENST00000433830 235 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 TBCAP1-201ENST00000436520 327 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.71□□□□□ -1.82
PTPN6P29350 AC239367.2-201ENST00000447309 705 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 AL050341.1-201ENST00000447743 313 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 AL162151.2-201ENST00000448875 158 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPN6P29350 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPN6P29350 RPS15AP1-201ENST00000457423 391 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 RNU7-140P-201ENST00000459546 60 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 NAP1L1P3-201ENST00000462291 880 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 NCOR1P1-202ENST00000486162 291 ntBASIC3.71□□□□□ -1.82
PTPN6P29350 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTPN6P29350 RNF138P1-201ENST00000502765 546 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms