Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-207P-201ENST00000384137 107 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 RNA5SP56-201ENST00000410277 118 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 RNU6-628P-201ENST00000410675 107 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DPA1P20036 AL691449.1-201ENST00000426570 421 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 KCTD9P3-201ENST00000434597 1169 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPA1P20036 HMGB1P37-201ENST00000439613 609 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 HSFY6P-201ENST00000445573 403 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AC044797.1-201ENST00000445744 679 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AC104306.1-201ENST00000449702 371 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPA1P20036 CEACAMP4-201ENST00000457676 421 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 snoU13.3-201ENST00000459441 104 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 RPL5P24-201ENST00000463742 885 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 SNRPGP3-201ENST00000469405 227 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 RPS17P11-201ENST00000474297 293 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AC110792.1-201ENST00000491826 472 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPA1P20036 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPA1P20036 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPA1P20036 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DPA1P20036 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPA1P20036 AC048346.1-201ENST00000510247 144 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4□□□□□ -1.77
HLA-DPA1P20036 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DPA1P20036 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DPA1P20036 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4□□□□□ -1.77
HLA-DPA1P20036 LSM6P2-201ENST00000552208 177 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPA1P20036 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPA1P20036 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DPA1P20036 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DPA1P20036 MRPS35P3-201ENST00000603189 709 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 MTATP6P2-201ENST00000603319 678 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AL139395.1-201ENST00000603662 160 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AL158211.2-201ENST00000607282 395 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 AP003392.5-201ENST00000607857 415 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 VN1R74P-201ENST00000613259 503 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DPA1P20036 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPA1P20036 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPA1P20036 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPA1P20036 RLIMP1-201ENST00000339626 1680 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPA1P20036 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 IQCB2P-201ENST00000401788 1633 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC066616.2-201ENST00000559334 1481 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 RNU6-629P-201ENST00000384061 103 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 TMSB4XP8-201ENST00000402089 135 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AL121978.1-201ENST00000402778 359 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 RPL21P65-201ENST00000406094 466 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AL356967.1-201ENST00000406305 431 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 MIR1193-201ENST00000408109 78 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 RNU4-6P-201ENST00000410804 122 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 TMSB4XP6-201ENST00000415187 135 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 TMSB4XP1-201ENST00000424567 135 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC087650.1-201ENST00000431445 468 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 ELOCP13-201ENST00000443934 329 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 SEPT14P24-201ENST00000447236 180 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC104073.1-201ENST00000451988 151 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 NDUFA5P7-201ENST00000452914 242 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 RPL21P18-201ENST00000469899 480 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC022034.3-201ENST00000471393 478 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 TRAV31-201ENST00000502780 342 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 RNU5A-7P-201ENST00000515979 116 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AL669831.4-202ENST00000590817 238 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC067959.1-201ENST00000604334 379 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC012531.5-201ENST00000611375 151 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC090116.1-201ENST00000615679 446 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 RMST_9.1-201ENST00000619945 193 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 AC103858.2-201ENST00000621471 543 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.99□□□□□ -1.77
HLA-DPA1P20036 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPA1P20036 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 RNU6-339P-201ENST00000384310 107 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 SFR1P2-201ENST00000421841 730 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms