Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR410-201ENST00000362222 80 ntBASIC7.83□□□□□ -1.16
CD44P16070 Y_RNA.121-201ENST00000363309 113 ntBASIC7.83□□□□□ -1.16
CD44P16070 MIR323B-201ENST00000385269 82 ntBASIC7.83□□□□□ -1.16
CD44P16070 RN7SKP222-201ENST00000410651 315 ntBASIC7.83□□□□□ -1.16
CD44P16070 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC7.83□□□□□ -1.16
CD44P16070 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC7.83□□□□□ -1.16
CD44P16070 DBIL5P2-201ENST00000443827 253 ntBASIC7.83□□□□□ -1.16
CD44P16070 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.83□□□□□ -1.16
CD44P16070 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.83□□□□□ -1.16
CD44P16070 AC008620.1-201ENST00000468453 592 ntBASIC7.83□□□□□ -1.16
CD44P16070 AC095057.1-201ENST00000507583 168 ntBASIC7.83□□□□□ -1.16
CD44P16070 RFPL4AP3-201ENST00000515267 345 ntBASIC7.83□□□□□ -1.16
CD44P16070 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 HMGB1P42-201ENST00000532126 553 ntBASIC7.83□□□□□ -1.16
CD44P16070 AL590705.4-201ENST00000532209 134 ntBASIC7.83□□□□□ -1.16
CD44P16070 AC090616.3-201ENST00000582184 217 ntBASIC7.83□□□□□ -1.16
CD44P16070 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.83□□□□□ -1.16
CD44P16070 uc_338.37-201ENST00000620113 186 ntBASIC7.83□□□□□ -1.16
CD44P16070 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 AC104162.1-201ENST00000430831 2382 ntBASIC7.83□□□□□ -1.16
CD44P16070 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CD44P16070 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CD44P16070 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.82□□□□□ -1.16
CD44P16070 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CD44P16070 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CD44P16070 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.82□□□□□ -1.16
CD44P16070 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CD44P16070 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CD44P16070 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CD44P16070 RNU6-263P-201ENST00000363811 107 ntBASIC7.82□□□□□ -1.16
CD44P16070 RNU6-294P-201ENST00000364999 102 ntBASIC7.82□□□□□ -1.16
CD44P16070 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CD44P16070 AC090114.1-201ENST00000393266 448 ntBASIC7.82□□□□□ -1.16
CD44P16070 AL160275.2-201ENST00000412010 394 ntBASIC7.82□□□□□ -1.16
CD44P16070 UQCRHP1-204ENST00000424609 274 ntBASIC7.82□□□□□ -1.16
CD44P16070 NOP56P2-201ENST00000447491 769 ntBASIC7.82□□□□□ -1.16
CD44P16070 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.82□□□□□ -1.16
CD44P16070 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC7.82□□□□□ -1.16
CD44P16070 U8.22-201ENST00000459141 133 ntBASIC7.82□□□□□ -1.16
CD44P16070 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 RN7SKP233-201ENST00000517005 110 ntBASIC7.82□□□□□ -1.16
CD44P16070 RNU6-762P-201ENST00000517107 102 ntBASIC7.82□□□□□ -1.16
CD44P16070 AC090151.1-201ENST00000520784 730 ntBASIC7.82□□□□□ -1.16
CD44P16070 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.82□□□□□ -1.16
CD44P16070 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.82□□□□□ -1.16
CD44P16070 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.82□□□□□ -1.16
CD44P16070 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC7.82□□□□□ -1.16
CD44P16070 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 AC099506.2-201ENST00000623074 221 ntBASIC7.82□□□□□ -1.16
CD44P16070 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.82□□□□□ -1.16
CD44P16070 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CD44P16070 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CD44P16070 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CD44P16070 IMMTP1-201ENST00000435590 2219 ntBASIC7.82□□□□□ -1.16
CD44P16070 HSP90AA5P-201ENST00000438353 2192 ntBASIC7.81□□□□□ -1.16
CD44P16070 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 TATDN2P3-201ENST00000452855 3665 ntBASIC7.81□□□□□ -1.16
CD44P16070 AC016583.1-201ENST00000624221 2431 ntBASIC7.81□□□□□ -1.16
CD44P16070 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CD44P16070 AC093849.1-201ENST00000563631 2209 ntBASIC7.81□□□□□ -1.16
CD44P16070 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CD44P16070 RNU6-1284P-201ENST00000363701 100 ntBASIC7.81□□□□□ -1.16
CD44P16070 RNU6-899P-201ENST00000363947 107 ntBASIC7.81□□□□□ -1.16
CD44P16070 RNA5SP172-201ENST00000365061 118 ntBASIC7.81□□□□□ -1.16
CD44P16070 RNU6-21P-201ENST00000384710 107 ntBASIC7.81□□□□□ -1.16
CD44P16070 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.81□□□□□ -1.16
CD44P16070 AC073900.1-201ENST00000429766 776 ntBASIC7.81□□□□□ -1.16
CD44P16070 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC7.81□□□□□ -1.16
CD44P16070 RPL7AP56-201ENST00000476420 791 ntBASIC7.81□□□□□ -1.16
CD44P16070 Y_RNA.685-201ENST00000516532 108 ntBASIC7.81□□□□□ -1.16
CD44P16070 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.81□□□□□ -1.16
CD44P16070 FKBP1BP1-201ENST00000553366 325 ntBASIC7.81□□□□□ -1.16
CD44P16070 MEG8-215ENST00000555354 469 ntTSL 3 BASIC7.81□□□□□ -1.16
CD44P16070 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms