Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 MIR4458-201ENST00000578872 75 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AL451086.1-201ENST00000605596 223 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC020923.1-201ENST00000624021 917 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC007529.1-201ENST00000418574 2178 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC104446.1-201ENST00000613728 1321 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DPB1P04440 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DPB1P04440 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DPB1P04440 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DPB1P04440 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.15□□□□□ -1.9
HLA-DPB1P04440 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 U8.11-201ENST00000384699 133 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 U8.12-201ENST00000384701 133 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC004987.3-201ENST00000413879 771 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AL445584.1-201ENST00000431451 330 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC105402.2-201ENST00000438503 358 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 U8.18-201ENST00000459285 133 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC020898.1-201ENST00000474167 787 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC073522.1-201ENST00000483312 377 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 SETP14-201ENST00000497538 873 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC110792.2-201ENST00000510278 224 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC008562.1-201ENST00000521763 330 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC083923.1-201ENST00000523708 376 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC104229.1-201ENST00000561364 255 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 MIR5047-201ENST00000579212 100 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 MIR5187-201ENST00000583479 76 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 NTAN1P1-201ENST00000603150 646 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC243756.2-201ENST00000618406 463 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC018816.2-201ENST00000621460 353 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AL357559.1-201ENST00000622228 274 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AL049737.1-201ENST00000413920 1403 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC026951.1-201ENST00000559530 2459 ntBASIC3.15□□□□□ -1.91
HLA-DPB1P04440 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPB1P04440 AC022031.1-201ENST00000585985 2593 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 MTCO1P18-201ENST00000455518 1419 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC007685.1-201ENST00000329806 452 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AL356967.1-201ENST00000406305 431 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 RN7SKP202-201ENST00000410439 330 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 RN7SKP159-201ENST00000410657 292 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AL158050.1-201ENST00000416077 457 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 RPL23AP82-202ENST00000427528 469 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC092017.2-201ENST00000427600 362 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 BX890604.2-201ENST00000427883 474 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 RPS26P30-201ENST00000443431 335 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 RNU7-170P-201ENST00000459303 61 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 CENPBD1P1-201ENST00000464061 469 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 RPL37P6-202ENST00000464216 403 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 RPL23AP44-201ENST00000482216 473 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 HMGB1P21-201ENST00000502313 581 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC021146.5-201ENST00000503544 545 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC020593.1-201ENST00000507399 299 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC008565.1-201ENST00000509046 885 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms