Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AC006349.1-201ENST00000555526 235 ntBASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AC006363.1-201ENST00000603806 463 ntBASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AL603758.1-201ENST00000618654 241 ntBASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 AL591926.1-201ENST00000620542 217 ntBASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 MTND4P27-201ENST00000450813 1354 ntBASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 ERCC6-202ENST00000374127 1782 ntBASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 CASC19-284ENST00000642142 1868 ntBASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN6Q9Y6Q1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 OR52B3P-201ENST00000314715 928 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 RN7SKP153-201ENST00000365026 316 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 RNU6-359P-201ENST00000365466 108 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 RNU6-456P-201ENST00000384493 107 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC068050.1-201ENST00000394891 380 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 RPL7P25-201ENST00000404151 721 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 VN1R36P-201ENST00000414936 291 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AL592293.2-201ENST00000422292 996 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AL353678.1-201ENST00000422735 741 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 RPS3AP54-201ENST00000435535 734 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AL450996.1-201ENST00000445574 1202 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC012512.1-201ENST00000446594 718 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AL136380.1-201ENST00000447970 162 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 RN7SL72P-201ENST00000460697 269 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC103851.1-201ENST00000506833 274 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 FTH1P11-201ENST00000517577 551 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC011853.1-201ENST00000518911 454 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 IGBP1P1-201ENST00000554337 1009 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC122134.1-201ENST00000565664 1104 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC011468.4-201ENST00000603942 409 ntBASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN6Q9Y6Q1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC104623.2-202ENST00000623477 4002 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 RLIMP2-201ENST00000427891 1563 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 OR5J1P-201ENST00000313544 939 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 RN7SKP275-201ENST00000364626 301 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 SNORA69-201ENST00000383895 132 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 OR4K12P-201ENST00000406538 961 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 RNU6-1068P-201ENST00000410958 103 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AC104333.2-201ENST00000422630 192 ntBASIC5.6□□□□□ -1.51
CAPN6Q9Y6Q1 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms