Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC090502.2-201ENST00000549267 280 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL356432.3-201ENST00000568952 465 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC087575.1-201ENST00000585087 229 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 BBIP1P1-201ENST00000602999 279 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC010378.1-201ENST00000619270 362 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 MIR7159-201ENST00000620587 66 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 MRPL57P1-201ENST00000621486 265 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL161637.1-201ENST00000622380 412 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL606534.2-204ENST00000635008 178 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC005034.3-201ENST00000604845 1747 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 CCT8P1-201ENST00000413611 1657 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 RNU6-251P-201ENST00000363235 104 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.276-201ENST00000364732 109 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 SNORA51.8-201ENST00000384234 132 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 RNA5SP91-201ENST00000390902 119 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AL591848.1-201ENST00000413092 322 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 OR6C66P-201ENST00000414917 930 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 UBE2FP1-201ENST00000416536 447 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AL138787.1-202ENST00000437804 898 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC004980.3-201ENST00000447046 365 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 RPL31P50-201ENST00000471002 296 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AL035404.1-201ENST00000497982 568 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 HSPE1P20-201ENST00000538133 289 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC068446.3-201ENST00000555285 382 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 MIR4298-201ENST00000584380 73 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC105224.1-201ENST00000587055 421 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC010620.2-201ENST00000600135 313 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 MTND4LP5-201ENST00000605152 292 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC009229.3-201ENST00000608056 282 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 AC132068.1-201ENST00000623805 459 ntBASIC6.15□□□□□ -1.42
COL25A1Q9BXS0 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 MTCO1P7-201ENST00000419523 1542 ntBASIC6.15□□□□□ -1.43
COL25A1Q9BXS0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC011008.2-201ENST00000624866 3352 ntBASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL25A1Q9BXS0 SALL4P7-201ENST00000555779 3120 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms