Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC021146.1-201ENST00000511202 716 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC026801.2-201ENST00000515352 425 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 IGKV2-18-201ENST00000522607 343 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 MRPS16P1-201ENST00000523462 412 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC022616.3-201ENST00000523940 148 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC109635.3-201ENST00000529536 185 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 MIR1273E-201ENST00000581165 102 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC090948.1-201ENST00000607464 549 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC131238.1-201ENST00000617135 328 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC009161.2-201ENST00000624626 138 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AL591135.1-201ENST00000401578 5914 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 RNU4-1-201ENST00000363925 141 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 U3.15-201ENST00000365398 212 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 Y_RNA.548-201ENST00000384656 105 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 RNU6-712P-201ENST00000410558 100 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 RPS7P15-201ENST00000415804 584 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC073410.1-201ENST00000435125 589 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 RBMX2P4-201ENST00000441256 376 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 RN7SL570P-201ENST00000484405 292 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC074255.1-201ENST00000511259 501 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 RNU6-410P-201ENST00000517006 107 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC021678.3-201ENST00000517893 476 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 OR4T1P-201ENST00000554933 911 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC025678.1-201ENST00000567861 338 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC007448.1-201ENST00000582714 234 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 ELOCP28-201ENST00000590044 317 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 RPL26P30-202ENST00000602923 645 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 Z84480.1-201ENST00000605131 311 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC017083.3-201ENST00000609955 700 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 MIR6826-201ENST00000617808 98 ntBASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.31□□□□□ -1.4
TRAIPQ9BWF2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 AC004656.1-201ENST00000568479 4951 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 NXPH1-205ENST00000602349 1953 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 AC013442.1-201ENST00000397347 228 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 MTATP6P18-201ENST00000417994 673 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 UQCRBP1-201ENST00000421129 336 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 GAPDHP48-201ENST00000436626 961 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 RPL38P1-201ENST00000460914 211 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 TRBV5-2-201ENST00000489095 273 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 FCF1P3-201ENST00000496394 590 ntBASIC6.3□□□□□ -1.4
TRAIPQ9BWF2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms