Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CCDC107Q8WV48 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC107Q8WV48 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC107Q8WV48 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC107Q8WV48 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CCDC107Q8WV48 SDAD1P1-202ENST00000524156 2051 ntBASIC3.79□□□□□ -1.8
CCDC107Q8WV48 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC018555.1-201ENST00000567548 1980 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AL139811.1-201ENST00000424779 2299 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC090229.1-201ENST00000590983 1609 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RNU6-374P-201ENST00000364146 108 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 Y_RNA.311-201ENST00000365068 96 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 SNORA70E-201ENST00000384492 135 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC016769.3-201ENST00000396562 315 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RSL24D1P4-201ENST00000400938 484 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AL109941.1-201ENST00000401925 229 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RN7SKP100-201ENST00000411258 284 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 VPS26BP1-201ENST00000417155 755 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RPS25P9-201ENST00000435591 252 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RPL23AP93-201ENST00000440847 484 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RN7SL585P-201ENST00000470538 280 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC146944.2-203ENST00000502493 354 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC139495.1-202ENST00000513164 354 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 IGKV2D-36-201ENST00000518643 226 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AP001922.4-201ENST00000526967 290 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AP000676.2-201ENST00000529711 301 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC008127.2-201ENST00000549925 1075 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC105129.1-201ENST00000560250 297 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC016180.1-201ENST00000567945 403 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC079171.1-201ENST00000568788 914 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RPL23AP97-201ENST00000568955 471 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 MIR4436B2-201ENST00000581415 91 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 MIR4436B1-201ENST00000583272 91 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 BPIFA4P-203ENST00000603168 689 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC005084.1-201ENST00000605160 304 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC004825.2-201ENST00000616634 455 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 MIR6719-201ENST00000622428 87 ntBASIC3.78□□□□□ -1.8
CCDC107Q8WV48 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC107Q8WV48 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
CCDC107Q8WV48 AC130650.2-201ENST00000618736 2403 ntBASIC3.78□□□□□ -1.81
CCDC107Q8WV48 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 AC011978.2-201ENST00000569835 2054 ntBASIC3.77□□□□□ -1.81
CCDC107Q8WV48 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 AC021146.4-201ENST00000309229 279 ntBASIC3.77□□□□□ -1.81
CCDC107Q8WV48 RNU6-621P-201ENST00000364752 109 ntBASIC3.77□□□□□ -1.81
CCDC107Q8WV48 SNORA51.6-201ENST00000384151 125 ntBASIC3.77□□□□□ -1.81
CCDC107Q8WV48 MIR105-2-201ENST00000385083 81 ntBASIC3.77□□□□□ -1.81
CCDC107Q8WV48 EIF5P1-201ENST00000400019 1231 ntBASIC3.77□□□□□ -1.81
CCDC107Q8WV48 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC107Q8WV48 RN7SKP56-201ENST00000410513 331 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms