Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VPS8Q8N3P4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS8Q8N3P4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS8Q8N3P4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS8Q8N3P4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS8Q8N3P4 RNA5SP502-201ENST00000362694 119 ntBASIC4.62□□□□□ -1.67
VPS8Q8N3P4 RN7SKP58-201ENST00000411010 305 ntBASIC4.62□□□□□ -1.67
VPS8Q8N3P4 OR6C71P-201ENST00000432580 913 ntBASIC4.62□□□□□ -1.67
VPS8Q8N3P4 AC083906.5-201ENST00000503722 328 ntBASIC4.62□□□□□ -1.67
VPS8Q8N3P4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS8Q8N3P4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS8Q8N3P4 AC091826.1-201ENST00000514065 313 ntBASIC4.62□□□□□ -1.67
VPS8Q8N3P4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS8Q8N3P4 AC245166.1-201ENST00000521012 253 ntBASIC4.62□□□□□ -1.67
VPS8Q8N3P4 AC010306.1-201ENST00000523223 1117 ntBASIC4.62□□□□□ -1.67
VPS8Q8N3P4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VPS8Q8N3P4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS8Q8N3P4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS8Q8N3P4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
VPS8Q8N3P4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS8Q8N3P4 SNORA18.3-201ENST00000384122 132 ntBASIC4.61□□□□□ -1.67
VPS8Q8N3P4 AC025750.2-201ENST00000442609 450 ntBASIC4.61□□□□□ -1.67
VPS8Q8N3P4 RN7SL75P-201ENST00000461926 281 ntBASIC4.61□□□□□ -1.67
VPS8Q8N3P4 HIGD1AP13-201ENST00000509878 289 ntBASIC4.61□□□□□ -1.67
VPS8Q8N3P4 RN7SKP289-201ENST00000517244 295 ntBASIC4.61□□□□□ -1.67
VPS8Q8N3P4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS8Q8N3P4 AC022509.4-201ENST00000621404 572 ntBASIC4.61□□□□□ -1.67
VPS8Q8N3P4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VPS8Q8N3P4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS8Q8N3P4 RPL23AP48-201ENST00000406913 488 ntBASIC4.6□□□□□ -1.67
VPS8Q8N3P4 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS8Q8N3P4 B3GNT2P1-201ENST00000434960 952 ntBASIC4.6□□□□□ -1.67
VPS8Q8N3P4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS8Q8N3P4 AC112492.1-201ENST00000449607 712 ntBASIC4.6□□□□□ -1.67
VPS8Q8N3P4 RN7SL633P-201ENST00000488974 297 ntBASIC4.6□□□□□ -1.67
VPS8Q8N3P4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS8Q8N3P4 TXNP6-201ENST00000510190 310 ntBASIC4.6□□□□□ -1.67
VPS8Q8N3P4 AC068657.1-201ENST00000520807 306 ntBASIC4.6□□□□□ -1.67
VPS8Q8N3P4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VPS8Q8N3P4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS8Q8N3P4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS8Q8N3P4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.59□□□□□ -1.67
VPS8Q8N3P4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS8Q8N3P4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS8Q8N3P4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
VPS8Q8N3P4 U3.26-201ENST00000391236 204 ntBASIC4.59□□□□□ -1.67
VPS8Q8N3P4 AL831737.1-201ENST00000441288 271 ntBASIC4.59□□□□□ -1.67
VPS8Q8N3P4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS8Q8N3P4 NIPA2P5-201ENST00000452282 464 ntBASIC4.59□□□□□ -1.67
VPS8Q8N3P4 AC037198.2-201ENST00000478845 733 ntBASIC4.59□□□□□ -1.67
VPS8Q8N3P4 AC114967.1-201ENST00000504890 259 ntBASIC4.59□□□□□ -1.67
VPS8Q8N3P4 AC006386.2-201ENST00000624491 75 ntBASIC4.59□□□□□ -1.67
VPS8Q8N3P4 AC012005.1-201ENST00000624575 75 ntBASIC4.59□□□□□ -1.67
VPS8Q8N3P4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
VPS8Q8N3P4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 RPL31P1-201ENST00000398116 372 ntBASIC4.58□□□□□ -1.68
VPS8Q8N3P4 AL031121.1-201ENST00000406553 254 ntBASIC4.58□□□□□ -1.68
VPS8Q8N3P4 RNA5SP274-201ENST00000410484 108 ntBASIC4.58□□□□□ -1.68
VPS8Q8N3P4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 MTND6P5-201ENST00000448266 512 ntBASIC4.58□□□□□ -1.68
VPS8Q8N3P4 S100A11P1-201ENST00000477525 312 ntBASIC4.58□□□□□ -1.68
VPS8Q8N3P4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 AC093831.2-201ENST00000624393 3427 ntBASIC4.58□□□□□ -1.68
VPS8Q8N3P4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
VPS8Q8N3P4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 RNU2-22P-201ENST00000411266 212 ntBASIC4.57□□□□□ -1.68
VPS8Q8N3P4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 CCRL1P1-201ENST00000449542 1053 ntBASIC4.57□□□□□ -1.68
VPS8Q8N3P4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 AC090136.1-201ENST00000520009 240 ntBASIC4.57□□□□□ -1.68
VPS8Q8N3P4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 CYCSP39-201ENST00000565821 309 ntBASIC4.57□□□□□ -1.68
VPS8Q8N3P4 LARP7P3-201ENST00000579888 337 ntBASIC4.57□□□□□ -1.68
VPS8Q8N3P4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 MIR6852-201ENST00000621699 66 ntBASIC4.57□□□□□ -1.68
VPS8Q8N3P4 AC108206.1-201ENST00000570186 4159 ntBASIC4.57□□□□□ -1.68
VPS8Q8N3P4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS8Q8N3P4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS8Q8N3P4 AL645937.1-202ENST00000421799 937 ntBASIC4.56□□□□□ -1.68
VPS8Q8N3P4 AC105272.1-201ENST00000438604 198 ntBASIC4.56□□□□□ -1.68
VPS8Q8N3P4 AL162389.1-201ENST00000449233 177 ntBASIC4.56□□□□□ -1.68
VPS8Q8N3P4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS8Q8N3P4 AC079600.2-201ENST00000550076 130 ntBASIC4.56□□□□□ -1.68
VPS8Q8N3P4 AC034105.3-201ENST00000565294 442 ntBASIC4.56□□□□□ -1.68
VPS8Q8N3P4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS8Q8N3P4 AC124856.1-201ENST00000600819 896 ntBASIC4.56□□□□□ -1.68
VPS8Q8N3P4 PLCE1P1-201ENST00000622094 305 ntBASIC4.56□□□□□ -1.68
VPS8Q8N3P4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VPS8Q8N3P4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms