Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 RPL36AP6-201ENST00000435770 321 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC104472.2-201ENST00000469035 601 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 PGAM1P13-201ENST00000507497 754 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 RN7SKP98-201ENST00000517070 156 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC073581.1-201ENST00000519036 575 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC040926.1-201ENST00000530195 238 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 RPA2P1-201ENST00000556557 721 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC090615.1-201ENST00000577519 154 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC024619.4-201ENST00000580924 316 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 RN7SL475P-201ENST00000583379 298 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC073046.2-201ENST00000604756 527 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AL138825.1-201ENST00000618587 192 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC089999.3-201ENST00000622440 577 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AL132640.3-201ENST00000630473 177 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 NXPH1-205ENST00000602349 1953 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AL121768.1-201ENST00000613917 2544 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC074141.1-201ENST00000588129 2995 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
SCUBE3Q8IX30 SMG1P5-202ENST00000529428 4219 ntBASIC6.77□□□□□ -1.32
SCUBE3Q8IX30 SMG1P2-201ENST00000566127 4221 ntBASIC6.77□□□□□ -1.32
SCUBE3Q8IX30 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SCUBE3Q8IX30 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
SCUBE3Q8IX30 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.77□□□□□ -1.32
SCUBE3Q8IX30 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
SCUBE3Q8IX30 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 BDP1P-201ENST00000582658 1990 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 RNA5SP240-201ENST00000365355 128 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 RNU6-190P-201ENST00000384154 102 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 Y_RNA.518-201ENST00000384552 113 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 PPIAP9-201ENST00000403866 498 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC007967.1-201ENST00000455422 1159 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 Z83838.1-202ENST00000456225 839 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC093816.1-201ENST00000515076 913 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 GAPDHP62-201ENST00000515313 990 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 SNORA40.14-201ENST00000516543 86 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 Y_RNA.703-201ENST00000516846 111 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 RNU6-255P-201ENST00000516957 105 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 COX6CP3-201ENST00000580869 223 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 MIR5692C1-201ENST00000585309 91 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AL021918.2-201ENST00000613415 194 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AC022400.9-201ENST00000623633 273 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 TRIM51GP-201ENST00000534741 1350 ntBASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 AL138713.1-201ENST00000624026 2130 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms