Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NIPA2P5-201ENST00000452282 464 ntBASIC3.72□□□□□ -1.81
NUP98P52948 AC021733.2-201ENST00000518830 497 ntBASIC3.72□□□□□ -1.81
NUP98P52948 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NUP98P52948 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.72□□□□□ -1.81
NUP98P52948 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP98P52948 OR2AS2P-201ENST00000606902 342 ntBASIC3.72□□□□□ -1.81
NUP98P52948 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP98P52948 GABRG2-229ENST00000641017 3628 ntBASIC3.72□□□□□ -1.81
NUP98P52948 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.71□□□□□ -1.82
NUP98P52948 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP98P52948 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP98P52948 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.71□□□□□ -1.82
NUP98P52948 RN7SKP222-201ENST00000410651 315 ntBASIC3.71□□□□□ -1.82
NUP98P52948 AL445528.1-201ENST00000426330 420 ntBASIC3.71□□□□□ -1.82
NUP98P52948 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.71□□□□□ -1.82
NUP98P52948 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP98P52948 PLCE1P1-201ENST00000622094 305 ntBASIC3.71□□□□□ -1.82
NUP98P52948 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP98P52948 AC017002.4-201ENST00000604721 1525 ntBASIC3.71□□□□□ -1.82
NUP98P52948 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP98P52948 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP98P52948 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUP98P52948 SNORA68.2-201ENST00000391263 128 ntBASIC3.7□□□□□ -1.82
NUP98P52948 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP98P52948 MTND6P5-201ENST00000448266 512 ntBASIC3.7□□□□□ -1.82
NUP98P52948 RPL5P23-201ENST00000496040 868 ntBASIC3.7□□□□□ -1.82
NUP98P52948 AC021146.1-201ENST00000511202 716 ntBASIC3.7□□□□□ -1.82
NUP98P52948 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.7□□□□□ -1.82
NUP98P52948 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.7□□□□□ -1.82
NUP98P52948 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP98P52948 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.7□□□□□ -1.82
NUP98P52948 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.7□□□□□ -1.82
NUP98P52948 AC007566.2-201ENST00000603642 413 ntBASIC3.7□□□□□ -1.82
NUP98P52948 AL356490.1-201ENST00000623079 479 ntBASIC3.7□□□□□ -1.82
NUP98P52948 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.7□□□□□ -1.82
NUP98P52948 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NUP98P52948 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUP98P52948 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUP98P52948 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUP98P52948 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUP98P52948 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NUP98P52948 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUP98P52948 RNU6-859P-201ENST00000362728 107 ntBASIC3.7□□□□□ -1.82
NUP98P52948 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP98P52948 AC087499.2-201ENST00000432861 149 ntBASIC3.7□□□□□ -1.82
NUP98P52948 METTL15P1-201ENST00000481421 1045 ntBASIC3.7□□□□□ -1.82
NUP98P52948 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP98P52948 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.7□□□□□ -1.82
NUP98P52948 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUP98P52948 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUP98P52948 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUP98P52948 AC011503.2-201ENST00000594230 1500 ntBASIC3.69□□□□□ -1.82
NUP98P52948 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NUP98P52948 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP98P52948 AL139281.1-201ENST00000422120 335 ntBASIC3.69□□□□□ -1.82
NUP98P52948 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.69□□□□□ -1.82
NUP98P52948 ARL5AP4-201ENST00000430731 512 ntBASIC3.69□□□□□ -1.82
NUP98P52948 AL162389.1-201ENST00000449233 177 ntBASIC3.69□□□□□ -1.82
NUP98P52948 MIR2114-201ENST00000516645 80 ntBASIC3.69□□□□□ -1.82
NUP98P52948 SNORA31.21-201ENST00000517180 77 ntBASIC3.69□□□□□ -1.82
NUP98P52948 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.69□□□□□ -1.82
NUP98P52948 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP98P52948 AC124856.1-201ENST00000600819 896 ntBASIC3.69□□□□□ -1.82
NUP98P52948 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
NUP98P52948 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.69□□□□□ -1.82
NUP98P52948 AP003485.2-201ENST00000623636 610 ntBASIC3.69□□□□□ -1.82
NUP98P52948 AC000123.3-201ENST00000624029 4975 ntBASIC3.69□□□□□ -1.82
NUP98P52948 AC093775.1-201ENST00000624154 1868 ntBASIC3.69□□□□□ -1.82
NUP98P52948 MTND5P23-201ENST00000430812 1655 ntBASIC3.69□□□□□ -1.82
NUP98P52948 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.68□□□□□ -1.82
NUP98P52948 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.68□□□□□ -1.82
NUP98P52948 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NUP98P52948 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NUP98P52948 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUP98P52948 GCNT6-201ENST00000379591 934 ntBASIC3.68□□□□□ -1.82
NUP98P52948 RNA5SP296-201ENST00000410523 111 ntBASIC3.68□□□□□ -1.82
NUP98P52948 AC007529.1-201ENST00000418574 2178 ntBASIC3.68□□□□□ -1.82
NUP98P52948 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP98P52948 AC002553.2-201ENST00000453217 340 ntBASIC3.68□□□□□ -1.82
NUP98P52948 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.68□□□□□ -1.82
NUP98P52948 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.68□□□□□ -1.82
NUP98P52948 AC104027.1-201ENST00000521887 300 ntBASIC3.68□□□□□ -1.82
NUP98P52948 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP98P52948 NRBF2P5-201ENST00000603087 788 ntBASIC3.68□□□□□ -1.82
NUP98P52948 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP98P52948 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NUP98P52948 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.68□□□□□ -1.82
NUP98P52948 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUP98P52948 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUP98P52948 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 MIR449A-201ENST00000362113 91 ntBASIC3.67□□□□□ -1.82
NUP98P52948 AC022018.1-201ENST00000430685 241 ntBASIC3.67□□□□□ -1.82
NUP98P52948 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP98P52948 AC109329.2-201ENST00000519658 482 ntBASIC3.67□□□□□ -1.82
NUP98P52948 AC010653.1-201ENST00000571108 881 ntBASIC3.67□□□□□ -1.82
NUP98P52948 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
NUP98P52948 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 ELOCP29-201ENST00000588193 334 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms