Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.39□□□□□ -1.87
RFC3P40938 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFC3P40938 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFC3P40938 CR381670.1-201ENST00000624291 1693 ntBASIC3.39□□□□□ -1.87
RFC3P40938 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFC3P40938 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
RFC3P40938 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFC3P40938 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RFC3P40938 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFC3P40938 ZNF90P1-201ENST00000480493 1951 ntBASIC3.38□□□□□ -1.87
RFC3P40938 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFC3P40938 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RFC3P40938 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFC3P40938 RAD1P1-201ENST00000231383 813 ntBASIC3.38□□□□□ -1.87
RFC3P40938 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFC3P40938 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFC3P40938 RNA5SP119-201ENST00000362715 117 ntBASIC3.38□□□□□ -1.87
RFC3P40938 MIR184-201ENST00000384962 84 ntBASIC3.38□□□□□ -1.87
RFC3P40938 HMGB1P10-201ENST00000395823 563 ntBASIC3.38□□□□□ -1.87
RFC3P40938 EI24P2-201ENST00000397776 1076 ntBASIC3.38□□□□□ -1.87
RFC3P40938 MIR1303-201ENST00000408625 86 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC3P40938 XKRYP4-201ENST00000414395 483 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AL691447.1-201ENST00000419456 387 ntBASIC3.38□□□□□ -1.87
RFC3P40938 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC3P40938 AL390879.2-203ENST00000426943 1121 ntBASIC3.38□□□□□ -1.87
RFC3P40938 USP9YP31-201ENST00000431405 881 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC3P40938 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC3P40938 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC3P40938 RPS3AP46-201ENST00000448352 682 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC3P40938 XKRYP5-201ENST00000449659 483 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.38□□□□□ -1.87
RFC3P40938 HMGB3P30-201ENST00000457863 606 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC146507.1-201ENST00000468335 354 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC084198.1-201ENST00000477747 402 ntBASIC3.38□□□□□ -1.87
RFC3P40938 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC3P40938 AC108941.1-201ENST00000502853 530 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC006499.5-201ENST00000505037 514 ntBASIC3.38□□□□□ -1.87
RFC3P40938 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC3P40938 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.38□□□□□ -1.87
RFC3P40938 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
RFC3P40938 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.38□□□□□ -1.87
RFC3P40938 AC004923.2-201ENST00000529649 369 ntBASIC3.38□□□□□ -1.87
RFC3P40938 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC3P40938 MTND5P21-201ENST00000531961 522 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC3P40938 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC3P40938 AC090877.1-201ENST00000561418 344 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AL133457.1-201ENST00000564251 987 ntBASIC3.38□□□□□ -1.87
RFC3P40938 NTAN1P1-201ENST00000603150 646 ntBASIC3.38□□□□□ -1.87
RFC3P40938 U3.45-201ENST00000607547 219 ntBASIC3.38□□□□□ -1.87
RFC3P40938 RMST_8.1-201ENST00000610287 165 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC019176.2-201ENST00000611579 315 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC084757.4-201ENST00000616350 526 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.38□□□□□ -1.87
RFC3P40938 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
RFC3P40938 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFC3P40938 UBE3AP2-201ENST00000429033 2259 ntBASIC3.38□□□□□ -1.87
RFC3P40938 MTCO1P12-201ENST00000414273 1543 ntBASIC3.38□□□□□ -1.87
RFC3P40938 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.38□□□□□ -1.87
RFC3P40938 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.38□□□□□ -1.87
RFC3P40938 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFC3P40938 AC007823.1-201ENST00000569932 1566 ntBASIC3.38□□□□□ -1.87
RFC3P40938 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC3P40938 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.37□□□□□ -1.87
RFC3P40938 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
RFC3P40938 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC3P40938 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC3P40938 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.37□□□□□ -1.87
RFC3P40938 ZNF826P-207ENST00000622273 1910 ntBASIC3.37□□□□□ -1.87
RFC3P40938 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC3P40938 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFC3P40938 SNORD115-48-201ENST00000364764 76 ntBASIC3.37□□□□□ -1.87
RFC3P40938 SNORD51.1-201ENST00000365405 77 ntBASIC3.37□□□□□ -1.87
RFC3P40938 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.37□□□□□ -1.87
RFC3P40938 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFC3P40938 PTMAP5-201ENST00000393073 333 ntBASIC3.37□□□□□ -1.87
RFC3P40938 TAF9BP2-201ENST00000400856 499 ntBASIC3.37□□□□□ -1.87
RFC3P40938 DNAJC19P6-201ENST00000401853 280 ntBASIC3.37□□□□□ -1.87
RFC3P40938 RNU2-17P-201ENST00000410290 190 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC245052.5-201ENST00000416320 649 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AIMP1P1-201ENST00000418670 937 ntBASIC3.37□□□□□ -1.87
RFC3P40938 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 MTND4LP14-201ENST00000429447 288 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AL050321.1-201ENST00000432363 400 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.37□□□□□ -1.87
RFC3P40938 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 RPS7P5-201ENST00000441482 581 ntBASIC3.37□□□□□ -1.87
RFC3P40938 PDSS1P2-201ENST00000449397 678 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 AC010468.1-201ENST00000461022 817 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC106707.2-201ENST00000484182 374 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms