Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LMO1P25800 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO1P25800 AC004817.4-201ENST00000602396 3625 ntBASIC4.41□□□□□ -1.7
LMO1P25800 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO1P25800 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO1P25800 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO1P25800 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO1P25800 OR55B1P-203ENST00000641518 2602 ntBASIC4.41□□□□□ -1.7
LMO1P25800 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO1P25800 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LMO1P25800 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
LMO1P25800 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LMO1P25800 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LMO1P25800 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LMO1P25800 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LMO1P25800 GVINP1-202ENST00000531871 7271 ntBASIC4.4□□□□□ -1.7
LMO1P25800 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LMO1P25800 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LMO1P25800 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.4□□□□□ -1.7
LMO1P25800 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 Y_RNA.145-201ENST00000363527 102 ntBASIC4.4□□□□□ -1.71
LMO1P25800 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 SNORA70-201ENST00000384436 135 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AL590290.1-201ENST00000405336 380 ntBASIC4.4□□□□□ -1.71
LMO1P25800 SPTLC1P2-201ENST00000407089 121 ntBASIC4.4□□□□□ -1.71
LMO1P25800 MIR548I3-201ENST00000408378 149 ntBASIC4.4□□□□□ -1.71
LMO1P25800 MIR548I1-201ENST00000408810 149 ntBASIC4.4□□□□□ -1.71
LMO1P25800 RN7SKP59-201ENST00000410520 314 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AC093655.2-201ENST00000425735 631 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO1P25800 ATP5F1P1-201ENST00000433775 569 ntBASIC4.4□□□□□ -1.71
LMO1P25800 ACTR3P2-201ENST00000439585 1257 ntBASIC4.4□□□□□ -1.71
LMO1P25800 HSPE1P28-201ENST00000443139 211 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO1P25800 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO1P25800 AC104634.1-201ENST00000452720 462 ntBASIC4.4□□□□□ -1.71
LMO1P25800 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO1P25800 BX248409.1-201ENST00000455497 255 ntBASIC4.4□□□□□ -1.71
LMO1P25800 RN7SL189P-201ENST00000468631 289 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AC073522.1-201ENST00000483312 377 ntBASIC4.4□□□□□ -1.71
LMO1P25800 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO1P25800 RPL32P9-201ENST00000487963 407 ntBASIC4.4□□□□□ -1.71
LMO1P25800 RN7SL547P-201ENST00000490793 290 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.4□□□□□ -1.71
LMO1P25800 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.4□□□□□ -1.71
LMO1P25800 IGBP1P5-201ENST00000507524 1000 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AC108078.1-201ENST00000508073 725 ntBASIC4.4□□□□□ -1.71
LMO1P25800 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO1P25800 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO1P25800 AC010587.2-201ENST00000511727 448 ntBASIC4.4□□□□□ -1.71
LMO1P25800 RNU6-406P-201ENST00000516470 107 ntBASIC4.4□□□□□ -1.71
LMO1P25800 COX6CP5-201ENST00000527162 228 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.4□□□□□ -1.71
LMO1P25800 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.4□□□□□ -1.71
LMO1P25800 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO1P25800 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO1P25800 MIR3912-201ENST00000577566 105 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO1P25800 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LMO1P25800 AP000238.1-201ENST00000608759 426 ntBASIC4.4□□□□□ -1.71
LMO1P25800 AC015908.5-201ENST00000623289 343 ntBASIC4.4□□□□□ -1.71
LMO1P25800 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO1P25800 MIR6863-201ENST00000636112 90 ntBASIC4.4□□□□□ -1.71
LMO1P25800 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LMO1P25800 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO1P25800 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
LMO1P25800 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO1P25800 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
LMO1P25800 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO1P25800 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO1P25800 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMO1P25800 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
LMO1P25800 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO1P25800 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO1P25800 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.39□□□□□ -1.71
LMO1P25800 RBPJP2-201ENST00000618187 1444 ntBASIC4.39□□□□□ -1.71
LMO1P25800 MAPK10-349ENST00000641767 3661 ntBASIC4.39□□□□□ -1.71
LMO1P25800 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.39□□□□□ -1.71
LMO1P25800 AC097461.1-201ENST00000568928 2821 ntBASIC4.39□□□□□ -1.71
LMO1P25800 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.39□□□□□ -1.71
LMO1P25800 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO1P25800 AC103591.2-201ENST00000265259 766 ntBASIC4.39□□□□□ -1.71
LMO1P25800 OR5P1P-201ENST00000299512 925 ntBASIC4.39□□□□□ -1.71
LMO1P25800 Y_RNA.67-201ENST00000362870 100 ntBASIC4.39□□□□□ -1.71
LMO1P25800 SNORA51.2-201ENST00000364595 132 ntBASIC4.39□□□□□ -1.71
LMO1P25800 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO1P25800 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LMO1P25800 AC009804.1-201ENST00000400949 179 ntBASIC4.39□□□□□ -1.71
LMO1P25800 RPL5P18-201ENST00000406671 891 ntBASIC4.39□□□□□ -1.71
LMO1P25800 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.39□□□□□ -1.71
LMO1P25800 RNU2-3P-201ENST00000410144 191 ntBASIC4.39□□□□□ -1.71
LMO1P25800 AMD1P2-201ENST00000412936 992 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms