Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 U6.98-201ENST00000637157 84 ntBASIC3.22□□□□□ -1.89
USF1P22415 NSRP1P1-201ENST00000444067 1693 ntBASIC3.22□□□□□ -1.89
USF1P22415 USP8P1-201ENST00000494673 3183 ntBASIC3.22□□□□□ -1.89
USF1P22415 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.22□□□□□ -1.89
USF1P22415 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USF1P22415 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
USF1P22415 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
USF1P22415 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.21□□□□□ -1.89
USF1P22415 SEPT7P7-201ENST00000420492 1301 ntBASIC3.21□□□□□ -1.89
USF1P22415 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
USF1P22415 OTUD4P1-201ENST00000237841 3067 ntBASIC3.21□□□□□ -1.9
USF1P22415 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
USF1P22415 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 UBE3AP2-201ENST00000429033 2259 ntBASIC3.21□□□□□ -1.9
USF1P22415 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
USF1P22415 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
USF1P22415 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
USF1P22415 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 NPM1P10-201ENST00000398310 865 ntBASIC3.21□□□□□ -1.9
USF1P22415 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC023128.2-201ENST00000420880 1223 ntBASIC3.21□□□□□ -1.9
USF1P22415 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 OR4F13P-201ENST00000428478 931 ntBASIC3.21□□□□□ -1.9
USF1P22415 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.21□□□□□ -1.9
USF1P22415 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 HMGB1P37-201ENST00000439613 609 ntBASIC3.21□□□□□ -1.9
USF1P22415 AL513321.1-201ENST00000441175 761 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC092809.1-201ENST00000441469 474 ntBASIC3.21□□□□□ -1.9
USF1P22415 RPS27P5-201ENST00000444247 244 ntBASIC3.21□□□□□ -1.9
USF1P22415 SETD6P1-201ENST00000444575 317 ntBASIC3.21□□□□□ -1.9
USF1P22415 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 RPS15AP29-201ENST00000445539 400 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC068135.1-201ENST00000446164 246 ntBASIC3.21□□□□□ -1.9
USF1P22415 RPL29P29-201ENST00000448725 423 ntBASIC3.21□□□□□ -1.9
USF1P22415 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 RPL5P23-201ENST00000496040 868 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC005798.1-201ENST00000513715 387 ntBASIC3.21□□□□□ -1.9
USF1P22415 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.21□□□□□ -1.9
USF1P22415 RN7SKP277-201ENST00000516895 283 ntBASIC3.21□□□□□ -1.9
USF1P22415 RN7SKP96-201ENST00000516948 297 ntBASIC3.21□□□□□ -1.9
USF1P22415 RNU4-60P-201ENST00000517239 135 ntBASIC3.21□□□□□ -1.9
USF1P22415 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC087369.1-201ENST00000520775 996 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.21□□□□□ -1.9
USF1P22415 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.21□□□□□ -1.9
USF1P22415 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.21□□□□□ -1.9
USF1P22415 AC139103.1-201ENST00000534696 1030 ntBASIC3.21□□□□□ -1.9
USF1P22415 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.21□□□□□ -1.9
USF1P22415 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.21□□□□□ -1.9
USF1P22415 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC006270.2-201ENST00000578523 652 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.21□□□□□ -1.9
USF1P22415 MIR5187-201ENST00000583479 76 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.21□□□□□ -1.9
USF1P22415 AL161756.2-201ENST00000604597 246 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC012468.1-201ENST00000604888 430 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC012531.5-201ENST00000611375 151 ntBASIC3.21□□□□□ -1.9
USF1P22415 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.21□□□□□ -1.9
USF1P22415 MIR1264-201ENST00000616374 69 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC121761.2-201ENST00000617300 689 ntBASIC3.21□□□□□ -1.9
USF1P22415 STMN1P1-201ENST00000617809 440 ntBASIC3.21□□□□□ -1.9
USF1P22415 AC138649.5-201ENST00000637456 137 ntBASIC3.21□□□□□ -1.9
USF1P22415 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.21□□□□□ -1.9
USF1P22415 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.21□□□□□ -1.9
USF1P22415 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 NCAPGP1-201ENST00000505112 1814 ntBASIC3.21□□□□□ -1.9
USF1P22415 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USF1P22415 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USF1P22415 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
USF1P22415 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.2□□□□□ -1.9
USF1P22415 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USF1P22415 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USF1P22415 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USF1P22415 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USF1P22415 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
USF1P22415 AL512646.1-201ENST00000269395 1077 ntBASIC3.2□□□□□ -1.9
USF1P22415 RNA5SP167-201ENST00000365461 116 ntBASIC3.2□□□□□ -1.9
USF1P22415 MIR483-201ENST00000385070 76 ntBASIC3.2□□□□□ -1.9
USF1P22415 ATP5F1P4-201ENST00000397288 746 ntBASIC3.2□□□□□ -1.9
USF1P22415 AL356057.1-202ENST00000402263 756 ntBASIC3.2□□□□□ -1.9
USF1P22415 PRRC2CP1-201ENST00000404428 159 ntBASIC3.2□□□□□ -1.9
USF1P22415 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.2□□□□□ -1.9
USF1P22415 SYF2P2-201ENST00000417620 583 ntBASIC3.2□□□□□ -1.9
USF1P22415 AC068533.1-201ENST00000418542 415 ntBASIC3.2□□□□□ -1.9
USF1P22415 AC008280.1-201ENST00000418851 412 ntBASIC3.2□□□□□ -1.9
USF1P22415 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.2□□□□□ -1.9
USF1P22415 ZFAND6P1-201ENST00000434138 605 ntBASIC3.2□□□□□ -1.9
USF1P22415 HMGN2P21-201ENST00000447764 270 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms