Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC006077.1-201ENST00000604746 343 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC113194.1-201ENST00000606037 500 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC245389.2-201ENST00000616023 576 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC242843.1-201ENST00000618702 573 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 Y_RNA.126-201ENST00000363382 111 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 RNU6-650P-201ENST00000365658 111 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 MTCO3P31-201ENST00000405526 789 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 RNU4-27P-201ENST00000410889 139 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 CYCSP19-201ENST00000411715 316 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 MTND4P22-201ENST00000413116 1169 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 HMGB3P31-201ENST00000413333 595 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AL513174.1-201ENST00000423182 629 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AP000907.1-201ENST00000428428 510 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC096992.1-201ENST00000459808 709 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AP000563.1-201ENST00000490865 758 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 OR5H4P-201ENST00000510851 923 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC006518.1-201ENST00000541449 943 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AL161713.1-201ENST00000555538 145 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC008507.1-201ENST00000587506 734 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC010680.3-201ENST00000604215 520 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 OR2BH1P-201ENST00000608850 864 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AL163051.2-201ENST00000618976 735 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AL445493.3-201ENST00000619568 477 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC022893.2-201ENST00000564832 3296 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC007823.1-201ENST00000569932 1566 ntBASIC3.17□□□□□ -1.9
HLA-DPB1P04440 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 RNU1-64P-201ENST00000365443 163 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 SNORD3H-201ENST00000384486 214 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC025750.1-201ENST00000399891 379 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AL445183.3-201ENST00000414168 502 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 SDCBPP2-201ENST00000424643 885 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 B3GNT2P1-201ENST00000434960 952 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AL645931.1-201ENST00000439737 410 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 RPS7P5-201ENST00000441482 581 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC068135.1-201ENST00000446164 246 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC092685.1-201ENST00000447960 1243 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC017099.1-201ENST00000448261 1028 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 HMGN1P18-201ENST00000457642 277 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AL133162.1-201ENST00000463228 453 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 RPL23AP67-201ENST00000465341 474 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC023598.1-201ENST00000472521 361 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC007688.1-201ENST00000475592 759 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 RPL7P47-201ENST00000497299 556 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC090071.1-201ENST00000507713 644 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 RN7SKP283-201ENST00000517197 270 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPB1P04440 AC007991.1-201ENST00000522680 631 ntBASIC3.16□□□□□ -1.9
HLA-DPB1P04440 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms