Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL4A1P02462 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
COL4A1P02462 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.59□□□□□ -1.84
COL4A1P02462 ELL2P4-201ENST00000446870 1376 ntBASIC3.59□□□□□ -1.84
COL4A1P02462 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
COL4A1P02462 RNA5SP432-201ENST00000362480 116 ntBASIC3.59□□□□□ -1.84
COL4A1P02462 SNORA9.2-201ENST00000365361 133 ntBASIC3.59□□□□□ -1.84
COL4A1P02462 MIR34A-201ENST00000385130 110 ntBASIC3.59□□□□□ -1.84
COL4A1P02462 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.84
COL4A1P02462 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.59□□□□□ -1.84
COL4A1P02462 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.59□□□□□ -1.84
COL4A1P02462 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.59□□□□□ -1.84
COL4A1P02462 RNA5SP217-201ENST00000515959 91 ntBASIC3.59□□□□□ -1.84
COL4A1P02462 AL590240.3-201ENST00000621416 943 ntBASIC3.59□□□□□ -1.84
COL4A1P02462 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A1P02462 AC092111.2-201ENST00000611627 1414 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 SRP72P2-201ENST00000344851 1979 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A1P02462 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL4A1P02462 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
COL4A1P02462 AL359693.1-201ENST00000614959 2407 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 SNORD56.3-201ENST00000363507 71 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A1P02462 AC127526.1-201ENST00000417526 366 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 RPL21P40-201ENST00000428586 483 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 SLC31A1P1-201ENST00000451221 567 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A1P02462 MRPL35P4-201ENST00000453682 566 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 AL049874.4-201ENST00000557593 255 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.58□□□□□ -1.84
COL4A1P02462 AL096803.3-201ENST00000609032 532 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 AC241377.1-201ENST00000619797 406 ntBASIC3.58□□□□□ -1.84
COL4A1P02462 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A1P02462 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A1P02462 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL4A1P02462 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A1P02462 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A1P02462 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.57□□□□□ -1.84
COL4A1P02462 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A1P02462 RNU4-82P-201ENST00000362443 140 ntBASIC3.57□□□□□ -1.84
COL4A1P02462 RPS4XP8-201ENST00000402039 771 ntBASIC3.57□□□□□ -1.84
COL4A1P02462 FAR1P1-201ENST00000427163 934 ntBASIC3.57□□□□□ -1.84
COL4A1P02462 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.57□□□□□ -1.84
COL4A1P02462 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
COL4A1P02462 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A1P02462 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.57□□□□□ -1.84
COL4A1P02462 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.57□□□□□ -1.84
COL4A1P02462 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.57□□□□□ -1.84
COL4A1P02462 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
COL4A1P02462 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A1P02462 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
COL4A1P02462 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL4A1P02462 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.57□□□□□ -1.84
COL4A1P02462 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
COL4A1P02462 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
COL4A1P02462 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A1P02462 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.56□□□□□ -1.84
COL4A1P02462 AC004972.1-201ENST00000623934 2209 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A1P02462 AC233263.6-201ENST00000631132 1963 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 LAP3P1-201ENST00000403648 294 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 AL603766.1-201ENST00000407763 664 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 AC019097.1-201ENST00000424783 735 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.56□□□□□ -1.84
COL4A1P02462 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.56□□□□□ -1.84
COL4A1P02462 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A1P02462 RPS3P1-201ENST00000456781 192 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 RPS17P11-201ENST00000474297 293 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A1P02462 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A1P02462 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.56□□□□□ -1.84
COL4A1P02462 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A1P02462 OR2AS2P-201ENST00000606902 342 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
COL4A1P02462 ASNSP1-201ENST00000518311 1939 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.56□□□□□ -1.84
COL4A1P02462 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
COL4A1P02462 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
COL4A1P02462 MTCO1P7-201ENST00000419523 1542 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 MTCO1P24-201ENST00000515438 1558 ntBASIC3.56□□□□□ -1.84
COL4A1P02462 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A1P02462 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A1P02462 FTLP6-201ENST00000355274 422 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.55□□□□□ -1.84
COL4A1P02462 RPL6P21-201ENST00000418672 846 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A1P02462 AC087499.2-201ENST00000432861 149 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 HMGB3P6-201ENST00000444896 598 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 AL162389.1-201ENST00000449233 177 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A1P02462 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A1P02462 RN7SKP272-201ENST00000516988 232 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 OR4C2P-201ENST00000530855 1064 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.55□□□□□ -1.84
COL4A1P02462 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A1P02462 MIR3945-201ENST00000581853 98 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 AC099654.11-201ENST00000638857 294 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms