Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.74□□□□□ -1.65
PROM1O43490 AC019226.1-201ENST00000625666 515 ntBASIC4.74□□□□□ -1.65
PROM1O43490 AC244258.1-201ENST00000637553 1071 ntBASIC4.74□□□□□ -1.65
PROM1O43490 OR2L1P-202ENST00000641567 1023 ntBASIC4.74□□□□□ -1.65
PROM1O43490 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.74□□□□□ -1.65
PROM1O43490 MTND4P16-201ENST00000466108 1367 ntBASIC4.74□□□□□ -1.65
PROM1O43490 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PROM1O43490 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
PROM1O43490 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PROM1O43490 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 AL031119.1-201ENST00000404707 1879 ntBASIC4.73□□□□□ -1.65
PROM1O43490 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 RNY4P24-201ENST00000362735 96 ntBASIC4.73□□□□□ -1.65
PROM1O43490 RNA5SP455-201ENST00000365190 119 ntBASIC4.73□□□□□ -1.65
PROM1O43490 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PROM1O43490 Z97832.1-201ENST00000402490 328 ntBASIC4.73□□□□□ -1.65
PROM1O43490 RPL17P12-201ENST00000413391 526 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM1O43490 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 RPL26P29-201ENST00000415623 438 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AL389915.1-201ENST00000422463 466 ntBASIC4.73□□□□□ -1.65
PROM1O43490 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM1O43490 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM1O43490 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM1O43490 BMS1P19-201ENST00000433925 393 ntBASIC4.73□□□□□ -1.65
PROM1O43490 RPL35AP21-201ENST00000437667 333 ntBASIC4.73□□□□□ -1.65
PROM1O43490 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 AC239367.2-201ENST00000447309 705 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AL691482.1-201ENST00000453255 87 ntBASIC4.73□□□□□ -1.65
PROM1O43490 RPS17P2-201ENST00000461663 408 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM1O43490 AC083982.1-201ENST00000485679 344 ntBASIC4.73□□□□□ -1.65
PROM1O43490 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 AC008549.1-201ENST00000512900 643 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC004980.4-201ENST00000513375 203 ntBASIC4.73□□□□□ -1.65
PROM1O43490 RNA5SP43-201ENST00000516559 110 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM1O43490 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM1O43490 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.73□□□□□ -1.65
PROM1O43490 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.73□□□□□ -1.65
PROM1O43490 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 AP001004.1-201ENST00000582468 324 ntBASIC4.73□□□□□ -1.65
PROM1O43490 KPNA2P3-201ENST00000584190 848 ntBASIC4.73□□□□□ -1.65
PROM1O43490 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM1O43490 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 AL596327.1-201ENST00000603629 213 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC091488.1-201ENST00000604239 660 ntBASIC4.73□□□□□ -1.65
PROM1O43490 RNU6-88P-201ENST00000606801 100 ntBASIC4.73□□□□□ -1.65
PROM1O43490 FAM25E-202ENST00000608562 189 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC093799.2-201ENST00000610062 578 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 AC243756.2-201ENST00000618406 463 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC018816.2-201ENST00000621460 353 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC091953.3-201ENST00000623220 236 ntBASIC4.73□□□□□ -1.65
PROM1O43490 CR392039.4-201ENST00000624968 501 ntBASIC4.73□□□□□ -1.65
PROM1O43490 AC120349.2-201ENST00000625002 298 ntBASIC4.73□□□□□ -1.65
PROM1O43490 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 MTCO1P14-201ENST00000441695 1559 ntBASIC4.73□□□□□ -1.65
PROM1O43490 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.73□□□□□ -1.65
PROM1O43490 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.73□□□□□ -1.65
PROM1O43490 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PROM1O43490 Z73965.1-201ENST00000623412 2297 ntBASIC4.72□□□□□ -1.65
PROM1O43490 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 AC004520.1-201ENST00000608362 1413 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AP000542.2-201ENST00000623199 6179 ntBASIC4.72□□□□□ -1.65
PROM1O43490 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 RNU6-259P-201ENST00000383999 107 ntBASIC4.72□□□□□ -1.65
PROM1O43490 SNORA70.10-201ENST00000384515 134 ntBASIC4.72□□□□□ -1.65
PROM1O43490 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PROM1O43490 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.72□□□□□ -1.65
PROM1O43490 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM1O43490 RN7SKP56-201ENST00000410513 331 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AC016397.1-201ENST00000412463 242 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM1O43490 GJA6P-201ENST00000415117 1042 ntBASIC4.72□□□□□ -1.65
PROM1O43490 RPL21P32-201ENST00000419877 477 ntBASIC4.72□□□□□ -1.65
PROM1O43490 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms