Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IGLV3-24-201ENST00000517477 197 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC022616.3-201ENST00000523940 148 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC011979.2-201ENST00000527568 352 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 OR5BC1P-201ENST00000529327 739 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 BNIP3P5-201ENST00000562290 498 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC034105.3-201ENST00000565294 442 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC020910.2-201ENST00000603635 610 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 Z84480.1-201ENST00000605131 311 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC010424.2-201ENST00000607594 443 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 MIR6780A-201ENST00000615089 68 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 Y_RNA.86-201ENST00000363020 111 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 RNU4-1-201ENST00000363925 141 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 RNA5SP479-201ENST00000364858 117 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 GJA6P-201ENST00000415117 1042 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 RPL18P10-201ENST00000425606 538 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 MTND1P14-201ENST00000427400 950 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC108059.3-201ENST00000456388 214 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 RPS20P24-201ENST00000457473 361 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 RPS4XP10-201ENST00000465034 731 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC022034.3-201ENST00000471393 478 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC055855.1-201ENST00000489563 579 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC022790.1-201ENST00000522872 204 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 MIR5096-201ENST00000583713 70 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 MIR4737-201ENST00000583979 81 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC098848.2-201ENST00000588023 330 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC025588.3-201ENST00000604182 274 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AL136363.1-201ENST00000605349 337 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AL021877.2-201ENST00000624442 10684 ntBASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TMEM88BA6NKF7 AC005332.5-201ENST00000591222 2919 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 OR5J1P-201ENST00000313544 939 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 SNORA69-201ENST00000383895 132 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 GLULP6-201ENST00000399502 913 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 HMGN1P24-201ENST00000412282 298 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 GSTM5P1-201ENST00000434751 660 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 DUTP1-201ENST00000493631 470 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AC010486.1-201ENST00000511793 424 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 RNA5SP337-201ENST00000517007 109 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 OR4T1P-201ENST00000554933 911 ntBASIC6.44□□□□□ -1.38
TMEM88BA6NKF7 AC055876.1-202ENST00000567053 138 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms