Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RN7SL283P-201ENST00000489055 303 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 CDH12P2-201ENST00000504393 298 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 MTATP6P22-201ENST00000507369 598 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC104619.4-201ENST00000510773 249 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC104027.1-201ENST00000521887 300 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 MTCO1P49-201ENST00000523429 802 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC026333.2-201ENST00000542164 106 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 GTF2IP22-201ENST00000554443 182 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC243654.2-201ENST00000612843 443 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AL356863.1-201ENST00000623378 1080 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC116563.2-201ENST00000624751 535 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 AC118273.1-201ENST00000525324 3006 ntBASIC2.6□□□□□ -1.99
HLA-DRB4X5D2U9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 RNF6P1-201ENST00000444889 1784 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC008264.2-201ENST00000610193 3731 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 DYNLT3P1-201ENST00000378574 347 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC025750.1-201ENST00000399891 379 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 RANP4-201ENST00000413361 655 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 SDCBPP3-201ENST00000419629 891 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 TRIAP1P1-201ENST00000427062 225 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 ISCA1P2-201ENST00000438679 421 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 RPL23AP67-201ENST00000465341 474 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 RN7SL542P-201ENST00000467147 294 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC020898.1-201ENST00000474167 787 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AP000563.1-201ENST00000490865 758 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 SNORA70.18-201ENST00000516696 98 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 SNORA70.19-201ENST00000516717 90 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 TRMT10BP1-201ENST00000519377 943 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC103843.2-201ENST00000530523 682 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 PTP4A1P6-201ENST00000531034 478 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC010735.1-201ENST00000567305 1026 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 MIR4506-201ENST00000584693 77 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC006130.2-201ENST00000586202 326 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC006557.5-201ENST00000603126 811 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 SNORA51-201ENST00000606420 132 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC090425.2-201ENST00000608818 501 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 U4.6-201ENST00000621618 127 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 CR392039.5-201ENST00000623201 510 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC034229.5-201ENST00000624258 185 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC112200.1-201ENST00000625015 234 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 AC092184.1-201ENST00000625042 715 ntBASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DRB4X5D2U9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HLA-DRB4X5D2U9 AC096656.1-201ENST00000623826 1364 ntBASIC2.59□□□□□ -2
HLA-DRB4X5D2U9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
HLA-DRB4X5D2U9 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.59□□□□□ -2
HLA-DRB4X5D2U9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 MIR148B-201ENST00000362252 99 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 RNA5SP295-201ENST00000362655 121 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 SNORD56.3-201ENST00000363507 71 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 RAB9AP3-201ENST00000412737 573 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 MTND2P16-201ENST00000419987 799 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC244033.1-201ENST00000426826 870 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC092017.2-201ENST00000427600 362 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 RPS15AP29-201ENST00000445539 400 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 RAB9AP1-201ENST00000449393 573 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC106707.2-201ENST00000484182 374 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms