Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LHX6Q9UPM6 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 Y_RNA.275-201ENST00000364726 110 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 RNU6-225P-201ENST00000384613 103 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC026310.1-201ENST00000396004 378 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 HMGN1P20-201ENST00000411849 300 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 DPPA2P3-201ENST00000411853 655 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 RPS15AP6-201ENST00000420703 385 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC234779.1-201ENST00000425910 285 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 CYCSP44-201ENST00000448560 313 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 NUTF2P7-201ENST00000453086 375 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC133134.1-201ENST00000466800 359 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC040975.1-201ENST00000472104 316 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC007998.1-201ENST00000474156 672 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC113367.2-201ENST00000505749 160 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 MIR4679-2-201ENST00000578358 77 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 MIR4308-201ENST00000580634 81 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC005518.2-201ENST00000603254 282 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC006077.1-201ENST00000604746 343 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AL008718.3-201ENST00000610217 321 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC089999.3-201ENST00000622440 577 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC073488.8-201ENST00000631952 757 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 AC079776.5-201ENST00000641920 211 ntBASIC6.82□□□□□ -1.32
LHX6Q9UPM6 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX6Q9UPM6 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AC092747.4-201ENST00000620519 1861 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 COX6B1P3-201ENST00000312310 260 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 SNORD116-14-201ENST00000383894 92 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 SNORD116-17-201ENST00000383929 92 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 SNORD116-15-201ENST00000384445 92 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 SNORD116-20-201ENST00000384529 92 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 SNORD116-19-201ENST00000384729 92 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 RPL36P1-201ENST00000419720 225 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 TOMM20P4-201ENST00000427861 435 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 PTMAP6-201ENST00000439110 327 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 HMGB1P25-201ENST00000468402 607 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 RPL23AP64-201ENST00000469465 435 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AC005017.1-201ENST00000482002 490 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AC018797.1-201ENST00000510791 255 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AC007458.1-201ENST00000542812 373 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 TRAV32-201ENST00000553993 340 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 OR1E3-201ENST00000575608 948 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AC011445.2-201ENST00000599274 173 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AC240442.1-201ENST00000616055 283 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 AL161420.1-201ENST00000619393 264 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 U1.31-201ENST00000620022 160 ntBASIC6.81□□□□□ -1.32
LHX6Q9UPM6 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX6Q9UPM6 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms