Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC108078.3-201ENST00000502633 489 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 COL6A4P2-205ENST00000509855 506 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 FTH1P21-201ENST00000512179 511 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 MIR2276-201ENST00000516886 89 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AL161713.1-201ENST00000555538 145 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 LINC00557-201ENST00000563184 1279 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC015726.1-201ENST00000602353 681 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC010680.4-201ENST00000605334 543 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC015849.2-201ENST00000605738 409 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 MIR7973-1-201ENST00000614683 76 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC073592.7-201ENST00000623659 507 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 FRG1DP-201ENST00000635586 771 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 ELL2P4-201ENST00000446870 1376 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC119744.1-201ENST00000454746 1715 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 SPRR2C-201ENST00000290702 219 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 RNU6-98P-201ENST00000384173 107 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 SNORA70E-201ENST00000384492 135 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 RNU1-13P-201ENST00000384499 162 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AL049693.1-201ENST00000402760 611 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC007899.1-201ENST00000412776 775 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 LINC01347-201ENST00000417964 355 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 NEK4P1-201ENST00000433383 879 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AL031663.1-201ENST00000437445 219 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 MED6P1-201ENST00000439659 713 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC069540.1-201ENST00000446320 988 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC009220.1-201ENST00000451614 275 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 RPS20P32-201ENST00000456044 356 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC006511.1-201ENST00000470614 315 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 TPT1P3-201ENST00000492841 512 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 POU5F1P7-201ENST00000508759 541 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC108064.1-201ENST00000513791 460 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 SNORA70.19-201ENST00000516717 90 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 IGHV3-76-201ENST00000522465 295 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 CIR1P1-201ENST00000524055 1133 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC025918.2-201ENST00000558683 763 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 AC115085.1-201ENST00000588924 229 ntBASIC3.2□□□□□ -1.9
HMG20AQ9NP66 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.2□□□□□ -1.9
HMG20AQ9NP66 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AL353743.4-201ENST00000422653 1547 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 RNU6-213P-201ENST00000384051 104 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 MIR141-201ENST00000384975 95 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 RNU6-796P-201ENST00000391086 107 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AL445189.1-201ENST00000405722 338 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 U3.39-201ENST00000408569 239 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 RNU2-17P-201ENST00000410290 190 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AC023128.2-201ENST00000420880 1223 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 OR8F1P-201ENST00000425243 930 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AC009965.2-201ENST00000425328 970 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AL390879.2-203ENST00000426943 1121 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AC073508.1-201ENST00000428866 656 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AL117339.2-201ENST00000430475 180 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 RPL23AP69-201ENST00000431134 458 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 PTP4A1P3-201ENST00000433661 420 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 HSFY6P-201ENST00000445573 403 ntBASIC3.19□□□□□ -1.9
HMG20AQ9NP66 AC017099.1-201ENST00000448261 1028 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms