Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ZSWIM5P3-201ENST00000511265 2743 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC006213.6-201ENST00000623722 4179 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC006378.2-201ENST00000623178 2476 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 MAPK10-357ENST00000641831 2858 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC016251.2-201ENST00000623393 3089 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC007938.2-201ENST00000604666 2634 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC011379.1-201ENST00000508713 3025 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.2-201ENST00000362330 96 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-252P-201ENST00000363232 107 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-923P-201ENST00000364753 107 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.314-201ENST00000365114 102 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-1276P-201ENST00000365372 104 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.473-201ENST00000384333 102 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-809P-201ENST00000384461 107 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.542-201ENST00000384641 111 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 HMGB1P20-201ENST00000402555 677 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AL391417.1-201ENST00000404100 426 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 RN7SKP216-201ENST00000411050 312 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL21P50-201ENST00000417698 477 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL30P13-201ENST00000418873 348 ntBASIC2.17□□□□□ -2.06
KRTAP4-3Q9BYR4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms