Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LSM6P2-201ENST00000552208 177 ntBASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 AC067852.4-201ENST00000590314 478 ntBASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 AP000811.1-201ENST00000603803 651 ntBASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 AC078899.5-201ENST00000612475 178 ntBASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC33Q8N5R6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC139713.2-215ENST00000641428 5037 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 RNA5SP447-201ENST00000363749 119 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 RNU6-553P-201ENST00000364047 96 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC073264.1-201ENST00000411508 416 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 CHIAP3-201ENST00000423668 1133 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 RPEP3-201ENST00000425462 676 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL732292.1-201ENST00000426692 226 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL390023.1-201ENST00000428836 262 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 RPS26P2-201ENST00000440331 348 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 USP9YP10-201ENST00000454868 628 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC092757.1-201ENST00000467293 467 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 BZW1P2-201ENST00000473537 826 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC087385.1-201ENST00000475062 312 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 USP9YP5-201ENST00000511770 630 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL356057.1-201ENST00000533798 831 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL110118.1-201ENST00000553543 400 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 VN1R92P-201ENST00000598511 928 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL354976.1-201ENST00000613843 387 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC008083.4-201ENST00000615076 444 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 MIR6830-201ENST00000636015 70 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL596275.2-204ENST00000641628 552 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AL596275.2-206ENST00000641957 626 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 AC108751.5-201ENST00000492880 1336 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 OR5BR1P-201ENST00000524992 1330 ntBASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC33Q8N5R6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 USP9YP33-201ENST00000412220 421 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 RPS15AP40-201ENST00000419621 391 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC004448.2-201ENST00000422360 586 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC073335.1-201ENST00000427776 363 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 KCTD10P1-201ENST00000434203 625 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 USP9YP35-201ENST00000435696 412 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 VN1R10P-201ENST00000447106 875 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 RPL39P6-201ENST00000448289 150 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC097262.1-201ENST00000452559 548 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 RPL30P6-201ENST00000475925 342 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC083829.1-201ENST00000503756 657 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC093281.2-201ENST00000510153 597 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 RNU6-759P-201ENST00000516740 103 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 HMGB1P19-201ENST00000517578 577 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 TOMM20P2-201ENST00000540082 421 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 HMGB3P26-201ENST00000560051 582 ntBASIC4.85□□□□□ -1.63
CCDC33Q8N5R6 AC073091.2-201ENST00000603205 907 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms