Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 SNORA9.2-201ENST00000365361 133 ntBASIC4.67□□□□□ -1.66
VPS8Q8N3P4 AC093719.1-202ENST00000392735 373 ntBASIC4.67□□□□□ -1.66
VPS8Q8N3P4 SNORA11.2-201ENST00000408318 127 ntBASIC4.67□□□□□ -1.66
VPS8Q8N3P4 HMGB3P23-201ENST00000414981 585 ntBASIC4.67□□□□□ -1.66
VPS8Q8N3P4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 DUTP6-201ENST00000425573 462 ntBASIC4.67□□□□□ -1.66
VPS8Q8N3P4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 TMED11P-201ENST00000479478 690 ntBASIC4.67□□□□□ -1.66
VPS8Q8N3P4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 AL451007.1-201ENST00000595491 289 ntBASIC4.67□□□□□ -1.66
VPS8Q8N3P4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS8Q8N3P4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 Y_RNA.510-201ENST00000384511 114 ntBASIC4.66□□□□□ -1.66
VPS8Q8N3P4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 AL445528.1-201ENST00000426330 420 ntBASIC4.66□□□□□ -1.66
VPS8Q8N3P4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 UQCRHP3-201ENST00000451503 251 ntBASIC4.66□□□□□ -1.66
VPS8Q8N3P4 AC010468.1-201ENST00000461022 817 ntBASIC4.66□□□□□ -1.66
VPS8Q8N3P4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS8Q8N3P4 AC004972.1-201ENST00000623934 2209 ntBASIC4.66□□□□□ -1.66
VPS8Q8N3P4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS8Q8N3P4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.65□□□□□ -1.66
VPS8Q8N3P4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
VPS8Q8N3P4 RN7SKP247-201ENST00000411094 308 ntBASIC4.65□□□□□ -1.66
VPS8Q8N3P4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.65□□□□□ -1.66
VPS8Q8N3P4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS8Q8N3P4 AC093156.1-201ENST00000440382 670 ntBASIC4.65□□□□□ -1.66
VPS8Q8N3P4 AC140076.1-201ENST00000449897 361 ntBASIC4.65□□□□□ -1.66
VPS8Q8N3P4 AC002553.2-201ENST00000453217 340 ntBASIC4.65□□□□□ -1.66
VPS8Q8N3P4 AC093278.1-201ENST00000494700 600 ntBASIC4.65□□□□□ -1.66
VPS8Q8N3P4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.65□□□□□ -1.66
VPS8Q8N3P4 AC007566.2-201ENST00000603642 413 ntBASIC4.65□□□□□ -1.66
VPS8Q8N3P4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.65□□□□□ -1.66
VPS8Q8N3P4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS8Q8N3P4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS8Q8N3P4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS8Q8N3P4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS8Q8N3P4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AL583834.1-201ENST00000406943 343 ntBASIC4.64□□□□□ -1.67
VPS8Q8N3P4 U3.42-201ENST00000408746 214 ntBASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AC245054.2-201ENST00000415639 319 ntBASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AC096576.1-201ENST00000489014 359 ntBASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AC022080.3-201ENST00000544433 482 ntBASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 CYCSP41-201ENST00000616920 296 ntBASIC4.64□□□□□ -1.67
VPS8Q8N3P4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.64□□□□□ -1.67
VPS8Q8N3P4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS8Q8N3P4 AC000403.1-201ENST00000613696 3585 ntBASIC4.64□□□□□ -1.67
VPS8Q8N3P4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 EEF1A1P41-201ENST00000414667 207 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 SETP10-201ENST00000424368 814 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AL450263.2-201ENST00000439400 589 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AC125238.1-201ENST00000448842 249 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 RNU1-87P-201ENST00000363727 170 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 SNORA80A-201ENST00000363922 136 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AC098799.1-201ENST00000504752 800 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 RN7SKP272-201ENST00000516988 232 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS8Q8N3P4 MIR4672-201ENST00000583126 81 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 MIMT1-201ENST00000597105 1050 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AC024153.1-201ENST00000603103 365 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AC110741.2-201ENST00000605278 268 ntBASIC4.63□□□□□ -1.67
VPS8Q8N3P4 AC074140.1-201ENST00000621617 208 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms