Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 MIR708-201ENST00000390708 88 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AP002812.4-201ENST00000532139 286 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 HSPA8P1-201ENST00000425843 1833 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 BX276092.3-201ENST00000424182 230 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 HMGB1P16-201ENST00000447155 540 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AC027287.1-201ENST00000553115 1453 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 ELOCP29-201ENST00000588193 334 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 RMST_9.1-201ENST00000619945 193 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AC073476.4-201ENST00000628409 72 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AC241585.2-209ENST00000638217 143 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 ASNSP1-201ENST00000518311 1939 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AC090971.4-201ENST00000560291 1800 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 MIR34A-201ENST00000385130 110 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 RN7SKP220-201ENST00000410611 288 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 RNA5SP247-201ENST00000411181 105 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 NPM1P24-201ENST00000428039 894 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 MTCO1P7-201ENST00000419523 1542 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 HSPE1P6-201ENST00000479457 291 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 RPL23AP73-201ENST00000492507 471 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AC141257.3-201ENST00000572906 215 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 AC067852.4-201ENST00000590314 478 ntBASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13DQ5THJ4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC096644.4-201ENST00000563417 2912 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 SNORA71.1-201ENST00000364523 117 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 RPL7P8-201ENST00000411964 730 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC006989.1-201ENST00000427212 131 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 RPS26P40-201ENST00000435209 294 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AL513124.1-201ENST00000450410 614 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC008549.1-201ENST00000512900 643 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC007954.1-201ENST00000554198 494 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC090312.2-201ENST00000582687 378 ntBASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.03□□□□□ -2.09
VPS13DQ5THJ4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 RPS4XP5-202ENST00000449995 1334 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 MTCO3P16-201ENST00000454456 754 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 RPS3P1-201ENST00000456781 192 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AC005229.2-201ENST00000456995 399 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 TRBV8-2-201ENST00000475637 270 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 FCF1P8-201ENST00000510322 597 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 MIR2276-201ENST00000516886 89 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 PRELID3BP8-201ENST00000604148 295 ntBASIC2.02□□□□□ -2.09
VPS13DQ5THJ4 AL157817.1-201ENST00000614264 790 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms