Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VAPAQ9P0L0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC092326.2-201ENST00000624772 1561 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RNU6-98P-201ENST00000384173 107 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RPL32P23-201ENST00000397237 405 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 PPIAP31-201ENST00000405422 495 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 HMGB1P13-201ENST00000406019 642 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RN7SKP156-201ENST00000410308 342 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RNA5SP31-201ENST00000411144 127 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RNU4-74P-201ENST00000411280 161 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RANP4-201ENST00000413361 655 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AL512504.1-201ENST00000415494 778 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RPS15AP40-201ENST00000419621 391 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RPL31P12-201ENST00000422587 358 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 FO393419.3-201ENST00000428741 282 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 CKS1BP5-201ENST00000434172 273 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 MRPS33P4-201ENST00000434892 317 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC023598.1-201ENST00000472521 361 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC093755.1-201ENST00000512950 1023 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 MTCO1P35-201ENST00000515270 228 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RN7SKP141-201ENST00000516167 338 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 SNORA70.19-201ENST00000516717 90 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RN7SKP277-201ENST00000516895 283 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 SOD1P3-201ENST00000518682 454 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AP004242.1-201ENST00000533701 349 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 CENPUP2-201ENST00000555897 1186 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AL590392.1-201ENST00000604960 446 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AL450489.1-201ENST00000612071 468 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC069209.1-201ENST00000619282 651 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC119674.1-207ENST00000641355 633 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC022031.1-201ENST00000585985 2593 ntBASIC3.31□□□□□ -1.88
VAPAQ9P0L0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VAPAQ9P0L0 AC007823.1-201ENST00000569932 1566 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 OR4A15-201ENST00000314706 1035 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AL049693.1-201ENST00000402760 611 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 RPS7P13-201ENST00000413955 498 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 DBIP2-201ENST00000419076 262 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AC241520.1-201ENST00000422654 1099 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 GLRXP1-201ENST00000423261 334 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 SETP5-201ENST00000437270 562 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 OR8L1P-201ENST00000534005 955 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 TRAV11-201ENST00000539512 339 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AL845331.3-202ENST00000562856 261 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AC090751.1-201ENST00000566966 267 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 MIR4443-201ENST00000585052 53 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 SUMO2P14-201ENST00000604488 293 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 MTND5P3-201ENST00000438536 1800 ntBASIC3.3□□□□□ -1.88
VAPAQ9P0L0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VAPAQ9P0L0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RNA5SP51-201ENST00000364750 119 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AC068538.1-201ENST00000376856 336 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RNU2-65P-201ENST00000410162 185 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RNU2-21P-201ENST00000410368 188 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RNU2-6P-201ENST00000411404 190 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms