Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC010149.2-201ENST00000637608 315 ntBASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 ERCC6-202ENST00000374127 1782 ntBASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 AC093311.1-201ENST00000506586 2021 ntBASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 AC016745.2-201ENST00000608834 3443 ntBASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.75□□□□□ -1.65
SSBP3Q9BWW4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 Y_RNA.133-201ENST00000363428 110 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 Y_RNA.445-201ENST00000384168 102 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 RNU6-574P-201ENST00000384265 107 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 RNU6-1158P-201ENST00000391167 107 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 RPL32P23-201ENST00000397237 405 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 RNU2-28P-201ENST00000410457 189 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AP000281.1-201ENST00000444036 316 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AL450996.1-201ENST00000445574 1202 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 SBDSP1-204ENST00000453858 737 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MTND5P22-201ENST00000458380 195 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 RPL7P39-201ENST00000481157 744 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 RPSAP51-201ENST00000497462 645 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC025674.1-201ENST00000507074 324 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 RNU6-794P-201ENST00000517261 64 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MRPS16P1-201ENST00000523462 412 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC090502.2-201ENST00000549267 280 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 NPM1P42-201ENST00000560329 862 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC090751.1-201ENST00000566966 267 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 SNORD95-201ENST00000579879 68 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MIR4742-201ENST00000581069 85 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC010680.4-201ENST00000605334 543 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 RNU6-84P-201ENST00000607737 102 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC145207.9-201ENST00000623802 325 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 AC119674.1-207ENST00000641355 633 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MTND4P14-201ENST00000435799 1354 ntBASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP3Q9BWW4 MRE11P1-201ENST00000464884 2127 ntBASIC4.73□□□□□ -1.65
SSBP3Q9BWW4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.73□□□□□ -1.65
SSBP3Q9BWW4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP3Q9BWW4 SRRM1P3-201ENST00000426911 2678 ntBASIC4.73□□□□□ -1.65
SSBP3Q9BWW4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SSBP3Q9BWW4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSBP3Q9BWW4 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.73□□□□□ -1.65
SSBP3Q9BWW4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
SSBP3Q9BWW4 RNU6-331P-201ENST00000384724 107 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms