Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 AC090229.1-201ENST00000590983 1609 ntBASIC4.21□□□□□ -1.74
RAB40AQ8WXH6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 RNVU1-3-201ENST00000364313 161 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 SNORD82-201ENST00000365530 70 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MIR153-1-201ENST00000384914 90 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AL080315.1-201ENST00000406055 466 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MIR1250-201ENST00000408098 113 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MIR1302-8-201ENST00000408342 128 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC083875.1-201ENST00000419509 405 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 ZYG11AP1-201ENST00000430329 837 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 PRPF38AP2-201ENST00000438179 851 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 CEACAMP6-201ENST00000452007 574 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 OR6C5P-201ENST00000452388 923 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 HIGD1AP8-201ENST00000453927 274 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 ARPC3P2-201ENST00000457786 533 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 RPL7AP28-201ENST00000464513 571 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 FAM172BP-201ENST00000487497 1089 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 RPL5P23-201ENST00000496040 868 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC117522.2-201ENST00000510049 657 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC110775.1-201ENST00000513721 462 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC022882.1-201ENST00000532142 501 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MIR4436B2-201ENST00000581415 91 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AP001180.3-201ENST00000582221 145 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MIR4436B1-201ENST00000583272 91 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MIR4691-201ENST00000583764 85 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 KPNA2P3-201ENST00000584190 848 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC010620.1-201ENST00000601088 1102 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC119501.1-201ENST00000603646 475 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC090116.1-201ENST00000615679 446 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 LINC00901.1-201ENST00000617252 152 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MIR6715B-201ENST00000637172 77 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 AC099063.3-201ENST00000642066 185 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 PABPC1P7-201ENST00000413177 1513 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 ZNF734P-201ENST00000419494 1534 ntBASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB40AQ8WXH6 MAPK10-263ENST00000641052 4307 ntBASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 Z73965.1-201ENST00000623412 2297 ntBASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RAB40AQ8WXH6 RN7SKP103-201ENST00000363848 320 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms