Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 AC021755.1-201ENST00000559747 1447 ntBASIC3.19□□□□□ -1.9
CLDN22Q8N7P3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 RNU1-64P-201ENST00000365443 163 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 MIR591-201ENST00000385290 95 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 HMGB1P10-201ENST00000395823 563 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AL445189.1-201ENST00000405722 338 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AC004987.3-201ENST00000413879 771 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AL445584.1-201ENST00000431451 330 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 ELOCP11-201ENST00000436690 332 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 CBX1P4-201ENST00000439415 457 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 ELOCP16-201ENST00000444494 332 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AP002884.2-201ENST00000471647 395 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AC007688.1-201ENST00000475592 759 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 HMGN1P11-201ENST00000508668 303 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 BNIP3P5-201ENST00000562290 498 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AC107294.3-201ENST00000609211 526 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AC055764.2-201ENST00000610089 670 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 AC099778.2-201ENST00000610904 211 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN22Q8N7P3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 SNORD9-201ENST00000362566 104 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 RNA5SP189-201ENST00000364920 115 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AL583834.1-201ENST00000406943 343 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 HMGB3P23-201ENST00000414981 585 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC114967.1-201ENST00000504890 259 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 MIR2276-201ENST00000516886 89 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC104027.1-201ENST00000521887 300 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 MED28P5-201ENST00000528254 438 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 OR5D17P-201ENST00000531492 978 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 GTF2IP22-201ENST00000554443 182 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC106785.1-201ENST00000565935 262 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AL391497.1-201ENST00000608671 547 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC121761.2-201ENST00000617300 689 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AC015726.3-201ENST00000624501 418 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 AL359715.4-201ENST00000606629 1436 ntBASIC3.17□□□□□ -1.9
CLDN22Q8N7P3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 SNORA31-201ENST00000362607 130 ntBASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 RNU6-618P-201ENST00000363518 112 ntBASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 RN7SKP202-201ENST00000410439 330 ntBASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 RN7SKP159-201ENST00000410657 292 ntBASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 AL035423.1-201ENST00000420331 213 ntBASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 RPS24P8-201ENST00000431490 402 ntBASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 RPL21P133-201ENST00000443666 476 ntBASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 AC078918.1-201ENST00000498515 228 ntBASIC3.16□□□□□ -1.9
CLDN22Q8N7P3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms