Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 SNORD27.1-201ENST00000516319 72 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 Y_RNA.710-201ENST00000516975 110 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 HMGB1P19-201ENST00000517578 577 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.31□□□□□ -1.4
PGBD3Q8N328 IGKV2-36-201ENST00000519999 223 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 AC008562.1-201ENST00000521763 330 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.31□□□□□ -1.4
PGBD3Q8N328 RPA2P1-201ENST00000556557 721 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.31□□□□□ -1.4
PGBD3Q8N328 TVP23CP2-201ENST00000571473 623 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.31□□□□□ -1.4
PGBD3Q8N328 AC005357.1-201ENST00000588399 301 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.31□□□□□ -1.4
PGBD3Q8N328 AC008687.2-201ENST00000597865 520 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.31□□□□□ -1.4
PGBD3Q8N328 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PGBD3Q8N328 AL157817.1-201ENST00000614264 790 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 AC007485.1-201ENST00000616755 206 ntBASIC6.31□□□□□ -1.4
PGBD3Q8N328 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PGBD3Q8N328 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
PGBD3Q8N328 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PGBD3Q8N328 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PGBD3Q8N328 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PGBD3Q8N328 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.31□□□□□ -1.4
PGBD3Q8N328 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC133552.1-201ENST00000569988 4007 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 SNORA21-201ENST00000362423 132 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 RNU5E-8P-201ENST00000363502 116 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 SNORA70H-201ENST00000383910 135 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 RNU6-1013P-201ENST00000384180 107 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 SNORA70J-201ENST00000384182 135 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 Y_RNA.530-201ENST00000384587 101 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 SNORA11B-201ENST00000408175 129 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 RNA5SP178-201ENST00000410380 128 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 RN7SKP229-201ENST00000410465 302 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 BX323014.1-201ENST00000412876 237 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 RPL36AP36-201ENST00000418616 301 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC092832.1-201ENST00000422934 400 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 PPIAP10-201ENST00000438675 458 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 FHP1-201ENST00000442741 703 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 RPL36AP15-201ENST00000444514 266 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 RPL21P23-201ENST00000446654 460 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 RPL12P25-201ENST00000455592 494 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 VPS25P1-201ENST00000455691 508 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 NXT1P1-201ENST00000458481 316 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC007998.1-201ENST00000474156 672 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC090958.1-201ENST00000511122 351 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC114781.3-201ENST00000512083 142 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 RN7SKP219-201ENST00000516825 296 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AP000676.2-201ENST00000529711 301 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC092121.1-201ENST00000569452 202 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC007546.1-201ENST00000619452 559 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AL162373.1-201ENST00000620433 407 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC127024.6-201ENST00000621598 424 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC010624.4-201ENST00000597606 1351 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 AC027228.2-201ENST00000567141 2154 ntBASIC6.3□□□□□ -1.4
PGBD3Q8N328 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.3□□□□□ -1.4
PGBD3Q8N328 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
PGBD3Q8N328 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PGBD3Q8N328 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PGBD3Q8N328 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
PGBD3Q8N328 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PGBD3Q8N328 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.29□□□□□ -1.4
PGBD3Q8N328 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms