Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 CPHL1P-201ENST00000461341 3407 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 MIR550A3-201ENST00000390735 95 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 ARF4P3-201ENST00000397387 509 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 RSL24D1P4-201ENST00000400938 484 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 RNA5SP104-201ENST00000410989 118 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 OR8G2P-201ENST00000412796 908 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 VPS26BP1-201ENST00000417155 755 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 UBTFL3-201ENST00000418934 1024 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AL035410.1-201ENST00000427409 427 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 FGF7P3-201ENST00000454645 303 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 RPS27AP17-201ENST00000463344 455 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 UBTFL6-201ENST00000477929 1024 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC025445.1-201ENST00000502728 300 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 PPBPP1-201ENST00000510807 373 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 HMGB3P13-201ENST00000511263 607 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 IGLV3-26-201ENST00000520756 302 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC008127.2-201ENST00000549925 1075 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AL512347.1-201ENST00000566420 503 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 MIR4270-201ENST00000581799 70 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC008638.3-201ENST00000603341 463 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AP002360.3-201ENST00000607673 710 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC105429.2-201ENST00000610567 517 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC091304.6-201ENST00000619761 202 ntBASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST3H2AQ7L7L0 AC104454.1-201ENST00000421341 1401 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 ZNF37BP-203ENST00000452306 1352 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 RN7SKP103-201ENST00000363848 320 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 RHOT1P2-201ENST00000366423 333 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 RNU6-1122P-201ENST00000384449 107 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC119751.3-201ENST00000399720 670 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 EIF5P1-201ENST00000400019 1231 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC073335.1-201ENST00000427776 363 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AL049745.1-201ENST00000433953 286 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AL132765.1-201ENST00000434165 553 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 RPS25P9-201ENST00000435591 252 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AL356276.2-201ENST00000435919 558 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC006466.1-201ENST00000438721 289 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 MTCYBP31-201ENST00000438855 1122 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 HMGB3P9-201ENST00000441799 583 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 RPL18AP17-201ENST00000455326 198 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC010326.1-201ENST00000462726 602 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC004263.1-201ENST00000479327 332 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 NDUFA5P12-201ENST00000503796 343 ntBASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST3H2AQ7L7L0 OR7H2P-201ENST00000513483 306 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms