Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GABRG2-229ENST00000641017 3628 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 MIR26A1-201ENST00000362205 77 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 AL445528.1-201ENST00000426330 420 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 NEAT1-202ENST00000501122 22743 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 AC017078.1-201ENST00000416146 368 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 RPS26P47-201ENST00000427219 348 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 RAB28P3-201ENST00000448325 597 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 RPS26P3-201ENST00000470205 348 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 AC004057.1-201ENST00000485827 348 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 RPS29P21-201ENST00000496272 170 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 IGHV3-63-201ENST00000518422 341 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 AC233280.2-201ENST00000603917 1070 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 MTCO1P8-201ENST00000416914 1523 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 AC021755.1-201ENST00000559747 1447 ntBASIC2.07□□□□□ -2.08
VPS13DQ5THJ4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AL645937.1-202ENST00000421799 937 ntBASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AC015917.1-201ENST00000579654 510 ntBASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 SNORD39.4-201ENST00000620099 78 ntBASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AL672167.1-206ENST00000356293 943 ntBASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 ZYG11AP1-201ENST00000430329 837 ntBASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AC126389.1-201ENST00000477436 290 ntBASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 AP003485.2-201ENST00000623636 610 ntBASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS13DQ5THJ4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC126124.2-201ENST00000413542 321 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 FTH1P1-201ENST00000437933 532 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 MRPS31P2-201ENST00000451581 518 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC034159.1-201ENST00000513885 583 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC017002.4-201ENST00000604721 1525 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 RN7SKP56-201ENST00000410513 331 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AL035413.2-201ENST00000604801 525 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AL031595.2-201ENST00000624215 19071 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AL391417.1-201ENST00000404100 426 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 U3.42-201ENST00000408746 214 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC009163.5-201ENST00000575421 637 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC018690.1-201ENST00000608144 626 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 MIR512-1-201ENST00000384913 84 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC073069.1-201ENST00000428657 441 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 RN7SL20P-201ENST00000488827 297 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 AC008413.1-201ENST00000511864 177 ntBASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS13DQ5THJ4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 MIR887-201ENST00000401258 79 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AC008264.1-201ENST00000447612 367 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 FDX1P2-201ENST00000450769 375 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 AC107934.2-201ENST00000518653 310 ntBASIC2.04□□□□□ -2.08
VPS13DQ5THJ4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms