Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AP005435.3-201ENST00000531260 3198 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CLRN1P58418 AC073544.1-201ENST00000600110 1595 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC005294.1-201ENST00000355509 281 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLRN1P58418 RNU6-343P-201ENST00000364709 104 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLRN1P58418 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.67□□□□□ -1.66
CLRN1P58418 SNORA67-201ENST00000384423 137 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLRN1P58418 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLRN1P58418 RNU6-780P-201ENST00000391030 104 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RPL21P67-201ENST00000402896 478 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 OR3A2-201ENST00000408891 1076 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.67□□□□□ -1.66
CLRN1P58418 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.67□□□□□ -1.66
CLRN1P58418 NANOGP6-201ENST00000429190 847 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC073464.1-201ENST00000429823 534 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.67□□□□□ -1.66
CLRN1P58418 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.67□□□□□ -1.66
CLRN1P58418 ARPC3P1-201ENST00000437218 533 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RPL23AP74-201ENST00000437246 471 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.67□□□□□ -1.66
CLRN1P58418 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.67□□□□□ -1.66
CLRN1P58418 RPS4XP4-201ENST00000443195 763 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RPL17P49-201ENST00000443728 411 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.67□□□□□ -1.66
CLRN1P58418 GAPDHP14-201ENST00000450472 937 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 FABP3P2-201ENST00000453169 399 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RPL38P1-201ENST00000460914 211 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC087879.1-201ENST00000474343 374 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RN7SL174P-201ENST00000475578 289 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 SIAH1P1-201ENST00000479411 923 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RPL7P39-201ENST00000481157 744 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RN7SL814P-201ENST00000487715 300 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RPL30P11-201ENST00000495304 339 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.67□□□□□ -1.66
CLRN1P58418 AC016559.2-201ENST00000510759 359 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 SAP18P1-201ENST00000512058 390 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC006427.1-201ENST00000514359 712 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RNU6-941P-201ENST00000516346 108 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC012400.1-201ENST00000518452 381 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.67□□□□□ -1.66
CLRN1P58418 AC022861.1-201ENST00000522981 663 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AP001893.2-201ENST00000526949 202 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 OR5AQ1P-201ENST00000527596 927 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 FAM92A1P1-201ENST00000528023 890 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.67□□□□□ -1.66
CLRN1P58418 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.67□□□□□ -1.66
CLRN1P58418 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.67□□□□□ -1.66
CLRN1P58418 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.67□□□□□ -1.66
CLRN1P58418 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.67□□□□□ -1.66
CLRN1P58418 CKS1BP3-201ENST00000600888 237 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 DUXAP4-201ENST00000603046 613 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AL590282.1-201ENST00000610379 1136 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC012409.3-201ENST00000611343 981 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC025253.1-201ENST00000613623 543 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AL359314.1-201ENST00000616913 261 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC006338.1-201ENST00000618453 749 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AL445264.1-201ENST00000621719 171 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 CYP4F35P-202ENST00000636121 390 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLRN1P58418 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLRN1P58418 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.67□□□□□ -1.66
CLRN1P58418 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.67□□□□□ -1.66
CLRN1P58418 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 AC002525.1-201ENST00000624392 1622 ntBASIC4.67□□□□□ -1.66
CLRN1P58418 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLRN1P58418 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.67□□□□□ -1.66
CLRN1P58418 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLRN1P58418 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.67□□□□□ -1.66
CLRN1P58418 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLRN1P58418 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 AC092747.4-201ENST00000620519 1861 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CLRN1P58418 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 OR55B1P-203ENST00000641518 2602 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.66□□□□□ -1.66
CLRN1P58418 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 GNG5P1-201ENST00000255500 204 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 RNY4P14-201ENST00000363656 96 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 RNA5SP132-201ENST00000364725 118 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 NPM1P40-201ENST00000412758 733 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 RPL12P9-201ENST00000412942 488 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AC234779.1-201ENST00000425910 285 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AL589872.1-201ENST00000426602 288 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 TIMM9P3-201ENST00000428659 274 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AL121776.1-201ENST00000429337 372 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AL389925.1-201ENST00000432257 728 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.66□□□□□ -1.66
CLRN1P58418 RPS29P10-201ENST00000439197 166 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AC112653.1-201ENST00000443851 386 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms