Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX1P48742 RNU1-87P-201ENST00000363727 170 ntBASIC4.17□□□□□ -1.74
LHX1P48742 SNORA72.3-201ENST00000365074 132 ntBASIC4.17□□□□□ -1.74
LHX1P48742 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX1P48742 RNU6-1151P-201ENST00000384684 107 ntBASIC4.17□□□□□ -1.74
LHX1P48742 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LHX1P48742 RN7SKP202-201ENST00000410439 330 ntBASIC4.17□□□□□ -1.74
LHX1P48742 RN7SKP159-201ENST00000410657 292 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AC004022.2-201ENST00000413824 193 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 AC106883.1-201ENST00000418805 562 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AC027644.1-201ENST00000419595 298 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 SFR1P2-201ENST00000421841 730 ntBASIC4.17□□□□□ -1.74
LHX1P48742 OSTCP5-201ENST00000425293 453 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX1P48742 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.17□□□□□ -1.74
LHX1P48742 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 VN1R25P-201ENST00000443385 738 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AL358794.1-201ENST00000445689 381 ntBASIC4.17□□□□□ -1.74
LHX1P48742 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 VN1R40P-201ENST00000455196 941 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX1P48742 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 GAPDHP36-201ENST00000480688 918 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AC079203.1-201ENST00000487972 404 ntBASIC4.17□□□□□ -1.74
LHX1P48742 RN7SL323P-201ENST00000494712 295 ntBASIC4.17□□□□□ -1.74
LHX1P48742 UBE2V1P12-201ENST00000503954 474 ntBASIC4.17□□□□□ -1.74
LHX1P48742 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX1P48742 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX1P48742 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX1P48742 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 OR4A12P-201ENST00000530847 918 ntBASIC4.17□□□□□ -1.74
LHX1P48742 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LHX1P48742 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
LHX1P48742 AL583856.2-201ENST00000606298 543 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AC026368.1-201ENST00000614934 690 ntBASIC4.17□□□□□ -1.74
LHX1P48742 AL591424.2-201ENST00000617023 128 ntBASIC4.17□□□□□ -1.74
LHX1P48742 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LHX1P48742 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LHX1P48742 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LHX1P48742 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX1P48742 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
LHX1P48742 AC068254.2-201ENST00000623938 3577 ntBASIC4.17□□□□□ -1.74
LHX1P48742 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.16□□□□□ -1.74
LHX1P48742 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX1P48742 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX1P48742 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
LHX1P48742 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 RNA5SP52-201ENST00000362448 134 ntBASIC4.16□□□□□ -1.74
LHX1P48742 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
LHX1P48742 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LHX1P48742 SFR1P1-201ENST00000403720 688 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX1P48742 AL449283.1-202ENST00000418249 604 ntBASIC4.16□□□□□ -1.74
LHX1P48742 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX1P48742 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 GTF2IP3-201ENST00000433887 494 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC122718.1-201ENST00000439448 744 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX1P48742 AC004854.1-201ENST00000440356 349 ntBASIC4.16□□□□□ -1.74
LHX1P48742 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 MTCYBP42-201ENST00000444653 1130 ntBASIC4.16□□□□□ -1.74
LHX1P48742 RANP8-201ENST00000444720 713 ntBASIC4.16□□□□□ -1.74
LHX1P48742 CDC27P1-201ENST00000445384 715 ntBASIC4.16□□□□□ -1.74
LHX1P48742 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX1P48742 NPM1P13-201ENST00000452663 865 ntBASIC4.16□□□□□ -1.74
LHX1P48742 FAM133DP-201ENST00000464802 691 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC146944.2-203ENST00000502493 354 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX1P48742 MTATP6P22-201ENST00000507369 598 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX1P48742 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.16□□□□□ -1.74
LHX1P48742 AC139495.1-202ENST00000513164 354 ntBASIC4.16□□□□□ -1.74
LHX1P48742 RNU6-415P-201ENST00000516252 97 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AP001207.2-201ENST00000519490 539 ntBASIC4.16□□□□□ -1.74
LHX1P48742 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX1P48742 AC022790.1-201ENST00000522872 204 ntBASIC4.16□□□□□ -1.74
LHX1P48742 MTCO3P15-201ENST00000526563 574 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.16□□□□□ -1.74
LHX1P48742 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX1P48742 AC069240.1-201ENST00000548774 375 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.16□□□□□ -1.74
LHX1P48742 RN7SL339P-201ENST00000580597 296 ntBASIC4.16□□□□□ -1.74
LHX1P48742 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.16□□□□□ -1.74
LHX1P48742 AC107982.3-201ENST00000584957 985 ntBASIC4.16□□□□□ -1.74
LHX1P48742 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX1P48742 AC008687.2-201ENST00000597865 520 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AL020997.3-201ENST00000602843 359 ntBASIC4.16□□□□□ -1.74
LHX1P48742 AC024060.1-201ENST00000607052 494 ntBASIC4.16□□□□□ -1.74
LHX1P48742 CYCSP41-201ENST00000616920 296 ntBASIC4.16□□□□□ -1.74
LHX1P48742 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX1P48742 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX1P48742 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms