Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 HMGB1P17-201ENST00000403495 628 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AL080315.1-201ENST00000406055 466 ntBASIC4.24□□□□□ -1.73
SOX2P48431 RN7SKP56-201ENST00000410513 331 ntBASIC4.24□□□□□ -1.73
SOX2P48431 RN7SKP293-201ENST00000411389 296 ntBASIC4.24□□□□□ -1.73
SOX2P48431 TBCAP2-201ENST00000416175 326 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 RPS3AP9-201ENST00000417027 792 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.24□□□□□ -1.73
SOX2P48431 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX2P48431 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.24□□□□□ -1.73
SOX2P48431 RPS26P47-201ENST00000427219 348 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 Z74696.2-201ENST00000436514 498 ntBASIC4.24□□□□□ -1.73
SOX2P48431 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 Z80107.2-201ENST00000445127 392 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 AC092647.2-201ENST00000452998 253 ntBASIC4.24□□□□□ -1.73
SOX2P48431 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 PPIAP21-201ENST00000464473 501 ntBASIC4.24□□□□□ -1.73
SOX2P48431 OR52A4P-201ENST00000472867 958 ntBASIC4.24□□□□□ -1.73
SOX2P48431 RN7SL717P-201ENST00000478343 297 ntBASIC4.24□□□□□ -1.73
SOX2P48431 RPL7P39-201ENST00000481157 744 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AL136038.1-201ENST00000497246 351 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC021678.1-201ENST00000505195 936 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC093809.1-201ENST00000509155 340 ntBASIC4.24□□□□□ -1.73
SOX2P48431 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 RNU6-709P-201ENST00000517257 104 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.24□□□□□ -1.73
SOX2P48431 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC025881.1-201ENST00000518851 512 ntBASIC4.24□□□□□ -1.73
SOX2P48431 DUXAP2-201ENST00000519198 589 ntBASIC4.24□□□□□ -1.73
SOX2P48431 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AP003392.2-201ENST00000527269 208 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX2P48431 AC074029.1-201ENST00000552531 1044 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 AC245505.1-201ENST00000556398 224 ntBASIC4.24□□□□□ -1.73
SOX2P48431 HSPE1P3-201ENST00000559254 309 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 AGGF1P8-201ENST00000562979 1000 ntBASIC4.24□□□□□ -1.73
SOX2P48431 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SOX2P48431 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 MIR4504-201ENST00000577413 92 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX2P48431 AC091805.2-201ENST00000603848 235 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC112187.2-201ENST00000604345 283 ntBASIC4.24□□□□□ -1.73
SOX2P48431 NDUFA8P1-201ENST00000605525 367 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 AC103710.4-201ENST00000609301 899 ntBASIC4.24□□□□□ -1.73
SOX2P48431 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC138932.5-201ENST00000617759 563 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC068722.2-201ENST00000618734 544 ntBASIC4.24□□□□□ -1.73
SOX2P48431 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX2P48431 MIR6837-201ENST00000620884 64 ntBASIC4.24□□□□□ -1.73
SOX2P48431 AC099494.2-201ENST00000623371 978 ntBASIC4.24□□□□□ -1.73
SOX2P48431 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SOX2P48431 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX2P48431 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX2P48431 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX2P48431 AC087190.4-201ENST00000574616 8334 ntBASIC4.24□□□□□ -1.73
SOX2P48431 PHKBP1-201ENST00000450951 1951 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC108751.5-201ENST00000492880 1336 ntBASIC4.23□□□□□ -1.73
SOX2P48431 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX2P48431 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX2P48431 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SOX2P48431 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX2P48431 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SOX2P48431 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX2P48431 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
SOX2P48431 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX2P48431 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SOX2P48431 ZNF603P-201ENST00000405613 487 ntBASIC4.23□□□□□ -1.73
SOX2P48431 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.23□□□□□ -1.73
SOX2P48431 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX2P48431 RPS27AP7-201ENST00000422792 455 ntBASIC4.23□□□□□ -1.73
SOX2P48431 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.23□□□□□ -1.73
SOX2P48431 RPS27P18-201ENST00000431701 247 ntBASIC4.23□□□□□ -1.73
SOX2P48431 RPL37P21-201ENST00000435890 276 ntBASIC4.23□□□□□ -1.73
SOX2P48431 RPL34P20-201ENST00000442771 351 ntBASIC4.23□□□□□ -1.73
SOX2P48431 OR7E125P-201ENST00000443450 846 ntBASIC4.23□□□□□ -1.73
SOX2P48431 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SOX2P48431 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX2P48431 AC000111.2-201ENST00000448200 210 ntBASIC4.23□□□□□ -1.73
SOX2P48431 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX2P48431 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SOX2P48431 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.23□□□□□ -1.73
SOX2P48431 SNRPFP4-201ENST00000456366 242 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC087879.1-201ENST00000474343 374 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC017015.1-201ENST00000477387 286 ntBASIC4.23□□□□□ -1.73
SOX2P48431 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX2P48431 AC005726.1-201ENST00000494679 427 ntBASIC4.23□□□□□ -1.73
SOX2P48431 PRELID3BP7-201ENST00000503606 469 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms